RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 DDX5P17844 614 aaKnown RBP16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 RGS4P49798 205 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 TCHHL1Q5QJ38 904 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 IQSEC1Q6DN90 963 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 MIB1Q86YT6 1006 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 TRIM45Q9H8W5 580 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 RNPEPL1Q9HAU8 725 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 CYP39A1Q9NYL5 469 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 SYNPO2Q9UMS6 1093 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 WDR27A2RRH5 827 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 HNRNPCL2B2RXH8 293 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 CSDE1O75534 798 aaKnown RBP16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 USP1O94782 785 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 UNC5CO95185 931 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 ETS1P14921 441 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 LHX1P48742 406 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 ACVR2BQ13705 512 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 ZRANB3Q5FWF4 1079 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 BLOC1S5Q8TDH9 187 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 ZBTB45Q96K62 511 aaPredicted RBP16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 TBCBQ99426 244 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 RBBP8Q99708 897 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 APOL5Q9BWW9 433 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 ZCWPW1Q9H0M4 648 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 VANGL2Q9ULK5 521 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 DEFB115Q30KQ5 88 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 SLC45A4Q5BKX6 768 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 ZCCHC23Q6ZST2 131 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 KIAA2013Q8IYS2 634 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 SPATA17Q96L03 361 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 GPR63Q9BZJ6 419 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 LRRC19Q9H756 370 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 SYNDIG1Q9H7V2 258 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 CYP3A7-CYP3A51PA0A087WV96 503 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 MEIS2O14770 477 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 ZNF23P17027 643 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 CYP3A7P24462 503 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 MIPP30301 263 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 ARL4DP49703 201 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 MRNIPQ6NTE8 343 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 FAM71AQ8IYT1 594 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 ADGRF2Q8IZF7 708 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 GDPD5Q8WTR4 605 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 DNAJB3Q8WWF6 145 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 PIH1D1Q9NWS0 290 aaKnown RBP16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 AP4S1Q9Y587 144 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 APOC4-APOC2K7ER74 178 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 PSMD10O75832 226 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 APOC2P02655 101 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 ADRB2P07550 413 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 GP5P40197 560 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 RHBDL3P58872 404 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 C15orf52Q6ZUT6 534 aaKnown RBP16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 UBP1Q9NZI7 540 aa16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 BARX2Q9UMQ3 279 aaPredicted RBP16.48■□□□□ 0.23
ARHGEF28-201ENST00000296794 CDC25CP30307 473 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 S100A5P33763 92 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 CHKAP35790 457 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 NDST1P52848 882 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 SFSWAPQ12872 951 aaKnown RBP16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 BRSK2Q8IWQ3 736 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 SLC4A9Q96Q91 983 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 A1CFQ9NQ94 594 aaKnown RBP16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 ACTL7BQ9Y614 415 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 ADGRA3Q8IWK6 1321 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 MSCO60682 206 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 MBL2P11226 248 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 BST2Q10589 180 aaKnown RBP16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 DPYSL3Q14195 570 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 SCN3BQ9NY72 215 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 DISP2A7MBM2 1401 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 ARHGEF9O43307 516 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 PEX5P50542 639 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 MRPS15P82914 257 aaKnown RBP16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 CNTN2Q02246 1040 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 NOGQ13253 232 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 ZC3H12BQ5HYM0 836 aaKnown RBP16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 ZNF467Q7Z7K2 595 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 SAE1Q9UBE0 346 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 NR2E3Q9Y5X4 410 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 SYNDIG1LA6NDD5 238 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 PRPF4O43172 522 aaKnown RBP eCLIP16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 MICAL2O94851 1124 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 HLA-DPA1P20036 260 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 CDH8P55286 799 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 MAMLD1Q13495 774 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 CSHL1Q14406 222 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 CCDC85BQ15834 202 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 ECM1Q16610 540 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 FSCN1Q16658 493 aaKnown RBP16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 RNF43Q68DV7 783 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 EXOC3L1Q86VI1 746 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 CCDC60Q8IWA6 550 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 BHMTQ93088 406 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 ZNF333Q96JL9 665 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 CATSPER2Q96P56 530 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 THUMPD3Q9BV44 507 aaKnown RBP16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 FICDQ9BVA6 458 aa16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 FAM32AQ9Y421 112 aaKnown RBP16.47■□□□□ 0.23
ARHGEF28-201ENST00000296794 PDE5AO76074 875 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms