RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 SNAP91O60641 907 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 TFE3P19532 575 aaPredicted RBP17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 ZNF618Q5T7W0 954 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 ATPAF2Q8N5M1 289 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 RORBQ92753 470 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 EXOSC4Q9NPD3 245 aaKnown RBP17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 EDF1O60869 148 aaKnown RBP17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 CYP2C9P11712 490 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 WASHC5Q12768 1159 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 TAB1Q15750 504 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 NOTUMQ6P988 496 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 TBCBQ99426 244 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 RAB26Q9ULW5 256 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 AAR2Q9Y312 384 aaKnown RBP17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 MATN2O00339 956 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 CCNHP51946 323 aaPredicted RBP17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 NAA20P61599 178 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 LIN52Q52LA3 116 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 SAMD7Q7Z3H4 446 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 MCOLN2Q8IZK6 566 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 DNAJC18Q9H819 358 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 CLUHO75153 1309 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 TMEM114B3SHH9 223 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 RTN3O95197 1032 aaPredicted RBP17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 SP100P23497 879 aaPredicted RBP17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 MAPK1P28482 360 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 RGS7P49802 495 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 GEMP55040 296 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 ARMC4Q5T2S8 1044 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 LRRC38Q5VT99 294 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 GLB1LQ6UWU2 654 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 CCDC81Q6ZN84 652 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 ADCY4Q8NFM4 1077 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 ZNF333Q96JL9 665 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 BTBD9Q96Q07 612 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 PURBQ96QR8 312 aaKnown RBP17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 PIDD1Q9HB75 910 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 SSU72Q9NP77 194 aaKnown RBP17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 PTTG2Q9NZH5 202 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 PRPF4O43172 522 aaKnown RBP eCLIP17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 FECHP22830 423 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 TIMM50Q3ZCQ8 353 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 GANCQ8TET4 914 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 CPNE1Q99829 537 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 USE1Q9NZ43 259 aa17.98■□□□□ 0.47
PCDHA13-201ENST00000289272 CDH3P22223 829 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 GP5P40197 560 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 GCNT1Q02742 428 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 MSLNQ13421 630 aaPredicted RBP17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 SLC5A9Q2M3M2 681 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 CENPLQ8N0S6 344 aaPredicted RBP17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 ZFYVE19Q96K21 471 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 NT5C1AQ9BXI3 368 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 UGT2B28Q9BY64 529 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 CASS4Q9NQ75 786 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 IMPAD1Q9NX62 359 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 R3HDM2Q9Y2K5 976 aaKnown RBP17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 TBC1D12O60347 775 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 MYCP01106 439 aaPredicted RBP17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 UGT3A1Q6NUS8 523 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 C4orf19Q8IY42 314 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 SLC35C1Q96A29 364 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 OLA1Q9NTK5 396 aaKnown RBP17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 LSM7Q9UK45 103 aaKnown RBP17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 RPS6KL1Q9Y6S9 549 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 UBA6A0AVT1 1052 aaPredicted RBP17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 NKRFO15226 690 aaKnown RBP eCLIP17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 KLRC4O43908 158 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 FKBP9O95302 570 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 TGDSO95455 350 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 CYBBP04839 570 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 SPANXN3Q5MJ09 141 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 CACHD1Q5VU97 1274 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 FKBP9P1Q75LS8 142 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 RNF180Q86T96 592 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 AADATQ8N5Z0 425 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 OMA1Q96E52 524 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 CATSPERBQ9H7T0 1116 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 KRT36O76013 467 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 CELF2O95319 508 aaKnown RBP17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 ATP6V1E1P36543 226 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 NFYCQ13952 458 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 FKBP1CQ5VVH2 108 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 RBM44Q6ZP01 1051 aaKnown RBP17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 RIPOR1Q6ZS17 1223 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 TJP2Q9UDY2 1190 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 DNAJB4Q9UDY4 337 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 PCDHB8Q9UN66 801 aa17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 FNDC3AQ9Y2H6 1198 aaKnown RBP17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.97■□□□□ 0.47
PCDHA13-201ENST00000289272 RNF103O00237 685 aa17.96■□□□□ 0.47
PCDHA13-201ENST00000289272 KPNA6O60684 536 aa17.96■□□□□ 0.47
PCDHA13-201ENST00000289272 RGS4P49798 205 aa17.96■□□□□ 0.47
PCDHA13-201ENST00000289272 BROXQ5VW32 411 aa17.96■□□□□ 0.47
PCDHA13-201ENST00000289272 EFCAB12Q6NXP0 572 aa17.96■□□□□ 0.47
PCDHA13-201ENST00000289272 EXOC3L1Q86VI1 746 aa17.96■□□□□ 0.47
PCDHA13-201ENST00000289272 SLC20A1Q8WUM9 679 aa17.96■□□□□ 0.47
PCDHA13-201ENST00000289272 ACOT9Q9Y305 439 aa17.96■□□□□ 0.47
PCDHA13-201ENST00000289272 BAZ2BQ9UIF8 2168 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms