RNA–Protein interactions for RNA: ENST00000267163.4

RB1-201, Transcript of RB transcriptional corepressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RB1, Length 4,840 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-201ENST00000267163 ARHGAP10A1A4S6 786 aa13.71□□□□□ -0.21
RB1-201ENST00000267163 BAG2O95816 211 aa13.71□□□□□ -0.21
RB1-201ENST00000267163 SP2Q02086 613 aa13.71□□□□□ -0.21
RB1-201ENST00000267163 BCL2L1Q07817 233 aa13.71□□□□□ -0.21
RB1-201ENST00000267163 C15orf59Q2T9L4 293 aaPredicted RBP13.71□□□□□ -0.21
RB1-201ENST00000267163 SPDYAQ5MJ70 313 aa13.71□□□□□ -0.21
RB1-201ENST00000267163 PRR23CQ6ZRP0 262 aa13.71□□□□□ -0.21
RB1-201ENST00000267163 SDCCAG3Q96C92 435 aa13.71□□□□□ -0.21
RB1-201ENST00000267163 CNOT10Q9H9A5 744 aaKnown RBP13.71□□□□□ -0.21
RB1-201ENST00000267163 XPNPEP1Q9NQW7 623 aa13.71□□□□□ -0.21
RB1-201ENST00000267163 ARHGAP28Q9P2N2 729 aa13.71□□□□□ -0.21
RB1-201ENST00000267163 SLC39A10Q9ULF5 831 aa13.71□□□□□ -0.21
RB1-201ENST00000267163 ZNF536O15090 1300 aa13.71□□□□□ -0.22
RB1-201ENST00000267163 GNGT2O14610 69 aa13.71□□□□□ -0.22
RB1-201ENST00000267163 TBL1XO60907 577 aa13.71□□□□□ -0.22
RB1-201ENST00000267163 TRIM16O95361 564 aa13.71□□□□□ -0.22
RB1-201ENST00000267163 MIPP30301 263 aa13.71□□□□□ -0.22
RB1-201ENST00000267163 PLA2G4AP47712 749 aa13.71□□□□□ -0.22
RB1-201ENST00000267163 LZTR1Q8N653 840 aa13.71□□□□□ -0.22
RB1-201ENST00000267163 FLCNQ8NFG4 579 aa13.71□□□□□ -0.22
RB1-201ENST00000267163 SPATA16Q9BXB7 569 aa13.71□□□□□ -0.22
RB1-201ENST00000267163 CLPBQ9H078 707 aa13.71□□□□□ -0.22
RB1-201ENST00000267163 RBM12Q9NTZ6 932 aaKnown RBP13.71□□□□□ -0.22
RB1-201ENST00000267163 NCAM2O15394 837 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 SPAG7O75391 227 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 SRP72O76094 671 aaKnown RBP13.7□□□□□ -0.22
RB1-201ENST00000267163 ACOX1Q15067 660 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 RAB30Q15771 203 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 SNX31Q8N9S9 440 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 TDRD5Q8NAT2 981 aaKnown RBP13.7□□□□□ -0.22
RB1-201ENST00000267163 LENG9Q96B70 501 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 RIPOR3Q96MK2 946 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 ALG13Q9NP73 1137 aaKnown RBP13.7□□□□□ -0.22
RB1-201ENST00000267163 VPS9D1Q9Y2B5 631 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 AFDNP55196 1824 aaKnown RBP13.7□□□□□ -0.22
RB1-201ENST00000267163 AGRPO00253 132 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 CRTAMO95727 393 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 PPP3CCP48454 512 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 ITGA8P53708 1063 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 FBXW4P57775 412 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 MBTD1Q05BQ5 628 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 MCL1Q07820 350 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 ZBTB41Q5SVQ8 909 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 TRIM68Q6AZZ1 485 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 CNKSR3Q6P9H4 555 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 PRSS55Q6UWB4 352 aaPredicted RBP13.7□□□□□ -0.22
RB1-201ENST00000267163 CCDC197Q8NCU1 140 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 VCPIP1Q96JH7 1222 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 PNKPQ96T60 521 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 TMEM121Q9BTD3 319 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 TASP1Q9H6P5 420 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 ZDHHC6Q9H6R6 413 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 PPARGC1AQ9UBK2 798 aaKnown RBP13.7□□□□□ -0.22
RB1-201ENST00000267163 TRMT6Q9UJA5 497 aaKnown RBP13.7□□□□□ -0.22
RB1-201ENST00000267163 LRRC37A3O60309 1634 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 GON4LQ3T8J9 2241 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 DIAPH2O60879 1101 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 LUC7L3O95232 432 aaKnown RBP13.7□□□□□ -0.22
RB1-201ENST00000267163 IL1BP01584 269 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 C8AP07357 584 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 COILP38432 576 aaPredicted RBP13.7□□□□□ -0.22
RB1-201ENST00000267163 CARSP49589 748 aaKnown RBP13.7□□□□□ -0.22
RB1-201ENST00000267163 KYNUQ16719 465 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 TSNAXIP1Q2TAA8 658 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 KCNT2Q6UVM3 1135 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 ACAD11Q709F0 780 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 C4orf32Q8N8J7 132 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 KREMEN2Q8NCW0 462 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 PPWD1Q96BP3 646 aaKnown RBP13.7□□□□□ -0.22
RB1-201ENST00000267163 MTMR8Q96EF0 704 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 PITPNM3Q9BZ71 974 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 LACRTQ9GZZ8 138 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 CFAP97Q9P2B7 532 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 SUPT3HB4E1H0 165 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 O00370 1275 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 B4GALT4O60513 344 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 SUPT3HO75486 399 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 C1QTNF8P60827 252 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 AARS2Q5JTZ9 985 aaKnown RBP13.7□□□□□ -0.22
RB1-201ENST00000267163 MON1AQ86VX9 555 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 PPIL6Q8IXY8 311 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 C3orf20Q8ND61 904 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 TSEN34Q9BSV6 310 aaKnown RBP13.7□□□□□ -0.22
RB1-201ENST00000267163 DERAQ9Y315 318 aa13.7□□□□□ -0.22
RB1-201ENST00000267163 COL1A1P02452 1464 aaPredicted RBP13.69□□□□□ -0.22
RB1-201ENST00000267163 SMARCB1Q12824 385 aa13.69□□□□□ -0.22
RB1-201ENST00000267163 CAPRIN1Q14444 709 aaKnown RBP13.69□□□□□ -0.22
RB1-201ENST00000267163 STAT4Q14765 748 aa13.69□□□□□ -0.22
RB1-201ENST00000267163 TCEA2Q15560 299 aa13.69□□□□□ -0.22
RB1-201ENST00000267163 VARS2Q5ST30 1063 aaKnown RBP13.69□□□□□ -0.22
RB1-201ENST00000267163 HYIQ5T013 277 aa13.69□□□□□ -0.22
RB1-201ENST00000267163 PPP1R26Q5T8A7 1209 aaPredicted RBP13.69□□□□□ -0.22
RB1-201ENST00000267163 SRLQ86TD4 932 aa13.69□□□□□ -0.22
RB1-201ENST00000267163 ECHDC2Q86YB7 292 aa13.69□□□□□ -0.22
RB1-201ENST00000267163 EXD1Q8NHP7 514 aa13.69□□□□□ -0.22
RB1-201ENST00000267163 MAP1BP46821 2468 aaKnown RBP13.69□□□□□ -0.22
RB1-201ENST00000267163 CLK2P49760 499 aaKnown RBP13.69□□□□□ -0.22
RB1-201ENST00000267163 CLCN6P51797 869 aa13.69□□□□□ -0.22
RB1-201ENST00000267163 MAGOHP61326 146 aaKnown RBP13.69□□□□□ -0.22
RB1-201ENST00000267163 TRIM32Q13049 653 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms