RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 CCDC185Q8N715 623 aa13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 RNF169Q8NCN4 708 aa13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 NLGN2Q8NFZ4 835 aa13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 OPTNQ96CV9 577 aa13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 POPDC2Q9HBU9 364 aa13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 KANSL3Q9P2N6 904 aa13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 RPS6KL1Q9Y6S9 549 aa13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 GOLGA8TH3BQL2 631 aa13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 HNRNPCL1O60812 293 aaKnown RBP13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 SMIM24O75264 130 aa13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 SERPINB6P35237 376 aa13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 VHLP40337 213 aa13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 KLC1Q07866 573 aa13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 LAMC2Q13753 1193 aa13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 PRKD1Q15139 912 aaPredicted RBP13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 ACSBG2Q5FVE4 666 aa13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 RAPH1Q70E73 1250 aa13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 CAND1Q86VP6 1230 aaKnown RBP13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 EFCAB3Q8N7B9 438 aa13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 WDR60Q8WVS4 1066 aa13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 MTBPQ96DY7 904 aa13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 DONSONQ9NYP3 566 aa13.02□□□□□ -0.33
RAB3IP-201ENST00000247833 ERVK-10P10266 1014 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 PROZP22891 400 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 HDAC4P56524 1084 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 OLIG2Q13516 323 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 ANKRD13AQ8IZ07 590 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 DEFB106AQ8N104 65 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 ZNF398Q8TD17 642 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 HTR3CQ8WXA8 447 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 SCG3Q8WXD2 468 aaKnown RBP13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 TBCBQ99426 244 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 EBNA1BP2Q99848 306 aaKnown RBP13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 EBF4Q9BQW3 602 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 XAB2Q9HCS7 855 aaKnown RBP13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 UBP1Q9NZI7 540 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 PRR5-ARHGAP8B1AHC4 643 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 M0QYT0 321 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 HUS1O60921 280 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 UBTFL6P0CB48 400 aaPredicted RBP13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 ARHGAP8P85298 464 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 ADIGQ0VDE8 80 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 STILQ15468 1287 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 GRIK4Q16099 956 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 CCDC142Q17RM4 750 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 ZNF669Q96BR6 464 aaPredicted RBP13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 EIF2AQ9BY44 585 aaKnown RBP13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 NXF3Q9H4D5 531 aaKnown RBP13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 GBA2Q9HCG7 927 aaPredicted RBP13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 SSU72Q9NP77 194 aaKnown RBP13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 NMRK1Q9NWW6 199 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 RNF181Q9P0P0 153 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 CPSF2Q9P2I0 782 aaKnown RBP13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 IGKV6-21A0A0C4DH24 114 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 TPP1O14773 563 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 DYNC1LI2O43237 492 aaPredicted RBP13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 DLDP09622 509 aaKnown RBP13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 RARBP10826 455 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 LMO2P25791 158 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 PPM1JQ5JR12 505 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 NXNQ6DKJ4 435 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 RBM15BQ8NDT2 890 aaKnown RBP13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 SLC26A7Q8TE54 656 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 SCYL1Q96KG9 808 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 VCXQ9H320 206 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 KIAA1257Q9ULG3 409 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 WASF2Q9Y6W5 498 aa13.01□□□□□ -0.33
RAB3IP-201ENST00000247833 RNF103O00237 685 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 CLDN5O00501 218 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 NEMP1O14524 444 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 TSPAN1O60635 241 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 RECQL4O94761 1208 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 PSMB4P28070 264 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 NEK3P51956 506 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 MCCD1P59942 119 aaPredicted RBP13□□□□□ -0.33
RAB3IP-201ENST00000247833 SH3D19Q5HYK7 790 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 SCUBE1Q8IWY4 988 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 OR6J1Q8NGC5 347 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 TSNARE1Q96NA8 513 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 GCOM2Q9BZD3 368 aaPredicted RBP13□□□□□ -0.33
RAB3IP-201ENST00000247833 LGR5O75473 907 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 ZMPSTE24O75844 475 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 PSMG1O95456 288 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 HSPA4LO95757 839 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 ZFXP17010 805 aaPredicted RBP13□□□□□ -0.33
RAB3IP-201ENST00000247833 ADORA2AP29274 412 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 SLC25A3Q00325 362 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 ITGA9Q13797 1035 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 SOWAHAQ2M3V2 549 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 KDELC2Q7Z4H8 507 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 CMC1Q7Z7K0 106 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 FBXO27Q8NI29 283 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 USP33Q8TEY7 942 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 CSPG4P5Q96PW8 444 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 UNKQ9C0B0 810 aaKnown RBP13□□□□□ -0.33
RAB3IP-201ENST00000247833 DNAI2Q9GZS0 605 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 PACSIN3Q9UKS6 424 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 FIS1Q9Y3D6 152 aa13□□□□□ -0.33
RAB3IP-201ENST00000247833 SDR42E2A6NKP2 422 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms