RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 BNIPLQ7Z465 357 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 BMP8AQ7Z5Y6 402 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 GPR149Q86SP6 731 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 PHLDB2Q86SQ0 1253 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 SPATA2LQ8IUW3 424 aaPredicted RBP13.73□□□□□ -0.21
SLIRP-201ENST00000238688 ARHGAP18Q8N392 663 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 EMC1Q8N766 993 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 GOLGA6L1Q8N7Z2 621 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 KCTD6Q8NC69 237 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 FAM172AQ8WUF8 416 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 MYLPFQ96A32 169 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 NTAN1Q96AB6 310 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 ASIC4Q96FT7 647 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 B3GALT6Q96L58 329 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 NECTIN4Q96NY8 510 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 MED4Q9NPJ6 270 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 MRPL17Q9NRX2 175 aaKnown RBP13.73□□□□□ -0.21
SLIRP-201ENST00000238688 ZNF446Q9NWS9 450 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 FAM53CQ9NYF3 392 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 HSFX1Q9UBD0 423 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 TJP2Q9UDY2 1190 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 MTRF1LQ9UGC7 380 aaKnown RBP13.73□□□□□ -0.21
SLIRP-201ENST00000238688 HCN4Q9Y3Q4 1203 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 WDFY4Q6ZS81 3184 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 CFAP69A5D8W1 941 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 C3orf70A6NLC5 250 aaPredicted RBP13.72□□□□□ -0.21
SLIRP-201ENST00000238688 TULP2O00295 520 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 C2CD2LO14523 706 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 TTI1O43156 1089 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 ATP2C2O75185 946 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 GABBR2O75899 941 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 PAPLNO95428 1278 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 GJB6O95452 261 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 ZBED1O96006 694 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 ITIH2P19823 946 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 TGM2P21980 687 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 ACAT1P24752 427 aaKnown RBP13.72□□□□□ -0.21
SLIRP-201ENST00000238688 KLRC2P26717 231 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 HTR7P34969 479 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 MTHFRP42898 656 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 BRCC3P46736 316 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 GLUD2P49448 558 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 ARSEP51690 589 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 TKTL1P51854 596 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 CALCOCO2Q13137 446 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 CASP8Q14790 479 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 ERMARDQ5T6L9 678 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 TMC5Q6UXY8 1006 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 C4orf22Q6V702 233 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 BZW1Q7L1Q6 419 aaKnown RBP13.72□□□□□ -0.21
SLIRP-201ENST00000238688 KRT222Q8N1A0 295 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 ARFGAP1Q8N6T3 406 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 SPPL2BQ8TCT7 592 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 HDAC7Q8WUI4 952 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 FAF2Q96CS3 445 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 C8orf48Q96LL4 319 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 NPY6RQ99463 290 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 SMOQ99835 787 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 EMILIN2Q9BXX0 1053 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 MAK16Q9BXY0 300 aaKnown RBP13.72□□□□□ -0.21
SLIRP-201ENST00000238688 PHACTR1Q9C0D0 580 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 EPC1Q9H2F5 836 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 FBXO44Q9H4M3 255 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 MAFFQ9ULX9 164 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 USP3Q9Y6I4 520 aa13.72□□□□□ -0.21
SLIRP-201ENST00000238688 TMEM221A6NGB7 291 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 HHLA1C9JL84 531 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 M0R296 226 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 LTFP02788 710 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 URODP06132 367 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 LCP1P13796 627 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 NR2C2P49116 596 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 PSEN1P49768 467 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 VCPP55072 806 aaKnown RBP13.71□□□□□ -0.21
SLIRP-201ENST00000238688 MAP3K7CLP57077 242 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 SLC7A5Q01650 507 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 SCAPQ12770 1279 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 BYSLQ13895 437 aaKnown RBP13.71□□□□□ -0.21
SLIRP-201ENST00000238688 HLTFQ14527 1009 aaKnown RBP eCLIP13.71□□□□□ -0.21
SLIRP-201ENST00000238688 PPP1R7Q15435 360 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 ATAT1Q5SQI0 421 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 CFAP58Q5T655 872 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 LILRA6Q6PI73 481 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 CROCCP2Q86T23 111 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 CPNE8Q86YQ8 564 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 CASKIN2Q8WXE0 1202 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 RAPGEF5Q92565 580 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 FAM149B1Q96BN6 582 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 HAUS1Q96CS2 278 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 SMOC2Q9H3U7 446 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 SFXN1Q9H9B4 322 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 NR2E1Q9Y466 385 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 PCDHB5Q9Y5E4 795 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 RAD54BQ9Y620 910 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 MYO16Q9Y6X6 1858 aa13.71□□□□□ -0.21
SLIRP-201ENST00000238688 HCRTO43612 131 aa13.7□□□□□ -0.22
SLIRP-201ENST00000238688 LIASO43766 372 aa13.7□□□□□ -0.22
SLIRP-201ENST00000238688 IL1R2P27930 398 aa13.7□□□□□ -0.22
SLIRP-201ENST00000238688 STIP1P31948 543 aaKnown RBP13.7□□□□□ -0.22
SLIRP-201ENST00000238688 HSPA9P38646 679 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms