RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 VPS33BQ9H267 617 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 L2HGDHQ9H9P8 463 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 IQSEC2Q5JU85 1478 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 TRIM43BA6NCK2 446 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 HMGCRP04035 888 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 POMKQ9H5K3 350 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 COPS7BQ9H9Q2 264 aaPredicted RBP13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 EFCAB1Q9HAE3 211 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 RBM22Q9NW64 420 aaKnown RBP eCLIP13.97□□□□□ -0.173e-7■■■■■ 45.5
TGFBR3-201ENST00000212355 IL1RAPL1Q9NZN1 696 aa13.97□□□□□ -0.17
TGFBR3-201ENST00000212355 C1orf232A0A0U1RR37 186 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 VDRP11473 427 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 RARGP13631 454 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 DARSP14868 501 aaKnown RBP13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 TCF3P15923 654 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 SLC11A2P49281 568 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 MPP3Q13368 585 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 BOP1Q14137 746 aaKnown RBP13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 ATP13A4Q4VNC1 1196 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 ARMC6Q6NXE6 501 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 MFSD7Q6UXD7 560 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 SPATA16Q9BXB7 569 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 MAP2P11137 1827 aaKnown RBP13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 SPAG6O75602 509 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 SREBF1P36956 1147 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 NAMPTP43490 491 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 CACNA2D1P54289 1103 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 ZBTB49Q6ZSB9 765 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 MCOLN2Q8IZK6 566 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 HNRNPLLQ8WVV9 542 aaKnown RBP13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 PNMA5Q96PV4 448 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 RBBP8Q99708 897 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 IKZF4Q9H2S9 585 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 PROSCO94903 275 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 PLCL1Q15111 1095 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 PGM5Q15124 567 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 SEC23AQ15436 765 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 NTRK3Q16288 839 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 PHACTR4Q8IZ21 702 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 PCDH20Q8N6Y1 951 aaKnown RBP13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 POLG2Q9UHN1 485 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 F8VP50 259 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 DCXO43602 365 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 FAM20BO75063 409 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 LGR5O75473 907 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 GLP2RO95838 553 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 POLD3Q15054 466 aaPredicted RBP13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 SLC41A1Q8IVJ1 513 aa13.96□□□□□ -0.17
TGFBR3-201ENST00000212355 RHOAP61586 193 aa13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 CHRNB3Q05901 458 aa13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 KPNB1Q14974 876 aaKnown RBP13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 BOLA3Q53S33 107 aa13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 SCIMPQ6UWF3 145 aa13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 DAGLBQ8NCG7 672 aa13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 NDEL1Q9GZM8 345 aa13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 REXO4Q9GZR2 422 aaKnown RBP13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 MID1IP1Q9NPA3 183 aa13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 UBQLN1Q9UMX0 589 aaKnown RBP13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 LACTBL1A8MY62 500 aa13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 CALB2P22676 271 aa13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 MRPS35P82673 323 aaKnown RBP13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 HIST2H2ACQ16777 129 aaPredicted RBP13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 HIST2H2AA3Q6FI13 130 aa13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 MRNIPQ6NTE8 343 aa13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 TMC3Q7Z5M5 1100 aa13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 MILR1Q7Z6M3 343 aa13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 MYO1HQ8N1T3 1032 aa13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 CERKQ8TCT0 537 aa13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 OPTNQ96CV9 577 aa13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 LRRC40Q9H9A6 602 aa13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 BPIFA1Q9NP55 256 aa13.96□□□□□ -0.18
TGFBR3-201ENST00000212355 MGAT4DA6NG13 374 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 FOXO6A8MYZ6 492 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 VAPBO95292 243 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 RHOCP08134 193 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 FDX1P10109 184 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 CNTN2Q02246 1040 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 FNDC5Q8NAU1 212 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 MIEF2Q96C03 454 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 DUSP9Q99956 384 aaKnown RBP13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 CHKBQ9Y259 395 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 SLC9A8Q9Y2E8 581 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 P4HA2O15460 535 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 CCT8P50990 548 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 IRX1P78414 480 aaPredicted RBP13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 PTPN11Q06124 597 aaPredicted RBP13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 DMPKQ09013 629 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 AP5B1Q2VPB7 878 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 WDR93Q6P2C0 686 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 ILDR2Q71H61 639 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 CHST13Q8NET6 341 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 CLPBQ9H078 707 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 RIBC2Q9H4K1 309 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 DDX4Q9NQI0 724 aaKnown RBP13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 NFKBIL1Q9UBC1 381 aaPredicted RBP13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 HS6ST1O60243 411 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 CLPTM1O96005 669 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 GJB1P08034 283 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 NELFEP18615 380 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms