RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Slc39a5Q9D856 535 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 EtfbQ9DCW4 255 aaKnown RBP10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Dpysl5Q9EQF6 564 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Cpb2Q9JHH6 422 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Irx4Q9QY61 515 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Gm8334F7CD45 553 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Soat2O88908 525 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Irf7P70434 457 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Vps41Q5KU39 853 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Rtl3Q6P1Y1 553 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Apol9bQ8C7I4 310 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Prpsap2Q8R574 369 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Apol9aQ8VDU3 310 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Dr1Q91WV0 176 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Vangl2Q91ZD4 521 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Rnf135Q9CWS1 417 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Slc22a17Q9D9E0 401 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Samd15F6XZJ7 620 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 PargO88622 969 aaKnown RBP10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Ppp3ccP48455 513 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Ntrk3Q6VNS1 825 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Tubb2aQ7TMM9 445 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Olfr867Q7TRF3 331 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 CcnyQ8BGU5 341 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 DrgxQ8BYH0 263 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 CgasQ8C6L5 507 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Ccdc87Q8CDL9 855 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Q8CDN1 933 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Tspan33Q8R3S2 283 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Smim14Q91VT8 99 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Ndufb5Q9CQH3 189 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Tubb2bQ9CWF2 445 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 NfkbizQ9EST8 728 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Trpc2Q9R244 1172 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Rp1l1Q8CGM2 1859 aa10.3□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 AspgA0JNU3 564 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Atp8b4A2ANX3 1194 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Serpina3iD3Z450 408 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Vmn2r115E9Q0E7 857 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Glb1P23780 647 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Srbd1Q497V5 1015 aaKnown RBP10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Igfbp7Q61581 281 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Trim62Q80V85 475 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Heatr3Q8BQM4 679 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Ppp6r2Q8R3Q2 923 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Tfap2dQ91ZK0 452 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Yaf2Q99LW6 179 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Grb14Q9JLM9 538 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Tmem215A7E1Z1 235 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Pcsk6F6XJP7 959 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 H2-T24F8VQG4 363 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 PrkchP23298 683 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Cntn3Q07409 1028 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Fbxw2Q60584 422 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Enpp4Q8BTJ4 456 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Pcdhb18Q91Y02 792 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Slc12a6Q924N4 1150 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Rabl3Q9D4V7 236 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 LrgukQ9D5S7 820 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Bace2Q9JL18 514 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 LgmnO89017 435 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Pim1P06803 397 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Apobec1P51908 229 aaKnown RBP10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 GscQ02591 256 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Hmgb4Q6P8W9 181 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Chsy1Q6ZQ11 800 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Zfp397Q7TNK4 527 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Olfr1057Q7TR75 315 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Samd7Q8C8Y5 445 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Aldh4a1Q8CHT0 562 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 3830403N18RikQ9D6C3 208 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Syde1Q9DBZ9 737 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Atg2aQ6P4T0 1914 aa10.29□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Vmn2r84D3YWE3 849 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 AdprhP54923 362 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Adamts8P57110 905 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 DhpsQ3TXU5 369 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Klra3Q64329 266 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Naa15Q80UM3 865 aaKnown RBP10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Vmn2r43Q80Z08 845 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Pak4Q8BTW9 593 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Traf3ip2Q8N7N6 555 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Trim66Q924W6 1242 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 MlxiplQ99MZ3 864 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Gm6588E9Q3K0 461 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 PrlP06879 226 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Zfy2P20662 777 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Hsd17b2P51658 381 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Nudt1P53368 156 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 SbdsP70122 250 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Pde1bQ01065 535 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 VcpQ01853 806 aaKnown RBP10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Pid1Q3UBG2 217 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Skap1Q3UUV5 355 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 KrtdapQ3V2T4 102 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Ccdc157Q5SPX1 718 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Fbxw11Q5SRY7 542 aaKnown RBP10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Dpysl3Q62188 570 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Wdr44Q6NVE8 915 aa10.28□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Kif11Q6P9P6 1052 aa10.28□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms