RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Ppm1kQ8BXN7 372 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Cdc16Q8R349 620 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Olfr1352Q8VGX5 309 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Bzw1Q9CQC6 419 aaKnown RBP9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Rgs10Q9CQE5 181 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Bex2Q9WTZ8 129 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Rnf19bA2A7Q9 732 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Rabgap1lA6H6A9 815 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Trim30bE9PVL6 203 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gnai2P08752 355 aaKnown RBP9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Idh2P54071 452 aaKnown RBP9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Dnal1Q05A62 190 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Cep76Q0VEJ0 659 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Atp11bQ6DFW5 1175 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ubtd2Q6PGH0 234 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Cdkn2aipQ8BI72 563 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Heatr3Q8BQM4 679 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Rps6kb1Q8BSK8 525 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Bri3bpQ8BXV2 253 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Nlrp3Q8R4B8 1033 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Olfr1459Q8VFV9 307 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Tc2nQ91XT6 489 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Lrrc49Q91YK0 686 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Sec14l2Q99J08 403 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Alg13Q9D8C3 1166 aaKnown RBP9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 NckipsdQ9ESJ4 714 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Kif15Q6P9L6 1387 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Rad50P70388 1312 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 GabreA2AMW3 916 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Clca3bE9PUL3 1044 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Macc1E9PXX8 851 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 C1qbpO35658 278 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Csf1P07141 552 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Lrrc4bP0C192 709 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Mpp1P70290 466 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Hace1Q3U0D9 909 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Fam35aQ3UEN2 891 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Nudt16Q6P3D0 195 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Kctd9Q80UN1 339 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Olfml2aQ8BHP7 681 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Lacc1Q8BZT9 430 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Tbc1d19Q8VDV7 526 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Olfr781Q8VFZ8 311 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Olfr812Q8VG64 310 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Vmn1r45Q8VIC7 318 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 FtmtQ9D5H4 237 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gtf2h1Q9DBA9 547 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gtf2ird1Q9JI57 1104 aaKnown RBP9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Lmbr1Q9JIT0 490 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Zfp212G3X8R7 492 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Vmn2r53L7N473 806 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Pip5k1bP70181 539 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Smad2Q62432 467 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Prl3a1Q78Y73 227 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Sytl5Q80T23 753 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 IrgcQ8C262 412 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ttc27Q8CD92 847 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Actl9Q8CG27 415 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Arfip2Q8K221 341 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Aco2Q99KI0 780 aaKnown RBP9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Tnpo2Q99LG2 887 aaKnown RBP9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Decr1Q9CQ62 335 aaKnown RBP9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ift43Q9DA69 206 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Nacc2Q9DCM7 586 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ing2Q9ESK4 281 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Lgi1Q9JIA1 557 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Dctn3Q9Z0Y1 186 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Knop1Q9Z2Q2 478 aaKnown RBP9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Brd4Q9ESU6 1400 aaKnown RBP9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 TnksQ6PFX9 1320 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Oip5A2AQ14 241 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Kpna3O35344 521 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ifi203O35368 408 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Slc22a8O88909 537 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Foxp1P58462 705 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Usp39Q3TIX9 564 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Trim40Q3UWA4 246 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 SvipQ3UZP4 77 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Zbtb45Q52KG4 520 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 JrkQ60976 557 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Tbccd1Q640P7 552 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 P4ha3Q6W3F0 542 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Stx16Q8BVI5 326 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ugt3a2Q8JZZ0 523 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Nprl3Q8VIJ8 569 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Pik3r4Q8VD65 1358 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Pira2F8VQ94 680 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ikzf3O08900 507 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 ProcP33587 460 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 PkmP52480 531 aaKnown RBP9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Rhox5P52651 210 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 PklrP53657 574 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Serpina3mQ03734 418 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Tatdn3Q3U1C6 294 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Plekha7Q3UIL6 1118 aaKnown RBP9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Nuak2Q8BZN4 639 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Mrpl50Q8VDT9 159 aaKnown RBP9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 HemgnQ9ERZ0 503 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ap3m1Q9JKC8 418 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Zkscan16A2ALW2 728 aa9.19□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms