RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 ITIH4Q14624 930 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 HGSNATQ68CP4 663 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 NPNTQ6UXI9 565 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 HSD3B7Q9H2F3 369 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 COL20A1Q9P218 1284 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 WDR27A2RRH5 827 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 TSPAN3O60637 253 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 CPA3P15088 417 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 NQO1P15559 274 aaKnown RBP14.78□□□□□ -0.04
SCARB2-208ENST00000638372 NCKAP1LP55160 1127 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 ABCE1P61221 599 aaKnown RBP14.78□□□□□ -0.04
SCARB2-208ENST00000638372 CNGA2Q16280 664 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 WSCD1Q658N2 575 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 ILDR2Q71H61 639 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 PTAR1Q7Z6K3 402 aaPredicted RBP14.78□□□□□ -0.04
SCARB2-208ENST00000638372 CNPY4Q8N129 248 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 LRRN4Q8WUT4 740 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 DNAJC9Q8WXX5 260 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 HES6Q96HZ4 224 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 XPNPEP3Q9NQH7 507 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 SIGLEC16A6NMB1 481 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 E9PBE3 544 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 KLHL41O60662 606 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 SCNN1BP51168 640 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 NOMO3P69849 1222 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 CSHL1Q14406 222 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 SYTL3Q4VX76 610 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 ZNF280DQ6N043 979 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 UNC45BQ8IWX7 931 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 C12orf29Q8N999 325 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 PGM2Q96G03 612 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 DSEQ9UL01 958 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 NFASCO94856 1347 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 IFT172Q9UG01 1749 aa14.78□□□□□ -0.04
SCARB2-208ENST00000638372 CBX4O00257 560 aa14.77□□□□□ -0.04
SCARB2-208ENST00000638372 NOL4O94818 638 aa14.77□□□□□ -0.04
SCARB2-208ENST00000638372 ALDH2P05091 517 aa14.77□□□□□ -0.04
SCARB2-208ENST00000638372 POU4F1Q01851 419 aa14.77□□□□□ -0.04
SCARB2-208ENST00000638372 FAAP100Q0VG06 881 aa14.77□□□□□ -0.04
SCARB2-208ENST00000638372 SUGP1Q8IWZ8 645 aaKnown RBP14.77□□□□□ -0.04
SCARB2-208ENST00000638372 TUBGCP3Q96CW5 907 aa14.77□□□□□ -0.04
SCARB2-208ENST00000638372 SRP72O76094 671 aaKnown RBP14.77□□□□□ -0.04
SCARB2-208ENST00000638372 PGK1P00558 417 aa14.77□□□□□ -0.04
SCARB2-208ENST00000638372 MBL2P11226 248 aaPredicted RBP14.77□□□□□ -0.04
SCARB2-208ENST00000638372 YBX3P16989 372 aaKnown RBP eCLIP14.77□□□□□ -0.04
SCARB2-208ENST00000638372 MARSP56192 900 aaKnown RBP14.77□□□□□ -0.04
SCARB2-208ENST00000638372 KLC1Q07866 573 aa14.77□□□□□ -0.04
SCARB2-208ENST00000638372 ITGA9Q13797 1035 aa14.77□□□□□ -0.04
SCARB2-208ENST00000638372 DPYSL3Q14195 570 aa14.77□□□□□ -0.04
SCARB2-208ENST00000638372 ZNF662Q6ZS27 426 aa14.77□□□□□ -0.04
SCARB2-208ENST00000638372 SMPD4Q9NXE4 827 aa14.77□□□□□ -0.04
SCARB2-208ENST00000638372 UTP6Q9NYH9 597 aaKnown RBP14.77□□□□□ -0.04
SCARB2-208ENST00000638372 C2orf81A6NN90 581 aa14.77□□□□□ -0.05
SCARB2-208ENST00000638372 SERPIND1P05546 499 aa14.77□□□□□ -0.05
SCARB2-208ENST00000638372 SCNN1GP51170 649 aa14.77□□□□□ -0.05
SCARB2-208ENST00000638372 MARC1Q5VT66 337 aa14.77□□□□□ -0.05
SCARB2-208ENST00000638372 TIGD7Q6NT04 549 aaPredicted RBP14.77□□□□□ -0.05
SCARB2-208ENST00000638372 C16orf89Q6UX73 402 aa14.77□□□□□ -0.05
SCARB2-208ENST00000638372 ADCK2Q7Z695 626 aa14.77□□□□□ -0.05
SCARB2-208ENST00000638372 PALB2Q86YC2 1186 aa14.77□□□□□ -0.05
SCARB2-208ENST00000638372 PCDHB18PQ96TA0 734 aa14.77□□□□□ -0.05
SCARB2-208ENST00000638372 ADAM2Q99965 735 aa14.77□□□□□ -0.05
SCARB2-208ENST00000638372 TMEM106CQ9BVX2 250 aa14.77□□□□□ -0.05
SCARB2-208ENST00000638372 TMEM120AQ9BXJ8 343 aa14.77□□□□□ -0.05
SCARB2-208ENST00000638372 CACNA1FO60840 1977 aa14.77□□□□□ -0.05
SCARB2-208ENST00000638372 KCNA4P22459 653 aa14.77□□□□□ -0.05
SCARB2-208ENST00000638372 ADRA1DP25100 572 aa14.77□□□□□ -0.05
SCARB2-208ENST00000638372 MLH1P40692 756 aa14.77□□□□□ -0.05
SCARB2-208ENST00000638372 RCN1Q15293 331 aa14.77□□□□□ -0.05
SCARB2-208ENST00000638372 FAM171A1Q5VUB5 890 aa14.77□□□□□ -0.05
SCARB2-208ENST00000638372 NT5DC4Q86YG4 428 aa14.77□□□□□ -0.05
SCARB2-208ENST00000638372 GPAMQ9HCL2 828 aa14.77□□□□□ -0.05
SCARB2-208ENST00000638372 TRPM5Q9NZQ8 1165 aa14.77□□□□□ -0.05
SCARB2-208ENST00000638372 SNX5Q9Y5X3 404 aa14.77□□□□□ -0.05
SCARB2-208ENST00000638372 APOA4P06727 396 aa14.76□□□□□ -0.05
SCARB2-208ENST00000638372 ABCG1P45844 678 aa14.76□□□□□ -0.05
SCARB2-208ENST00000638372 TUBP50607 506 aa14.76□□□□□ -0.05
SCARB2-208ENST00000638372 MMRN1Q13201 1228 aa14.76□□□□□ -0.05
SCARB2-208ENST00000638372 BSNDQ8WZ55 320 aa14.76□□□□□ -0.05
SCARB2-208ENST00000638372 PKD2L2Q9NZM6 624 aa14.76□□□□□ -0.05
SCARB2-208ENST00000638372 TRMT6Q9UJA5 497 aaKnown RBP14.76□□□□□ -0.05
SCARB2-208ENST00000638372 SALL4Q9UJQ4 1053 aa14.76□□□□□ -0.05
SCARB2-208ENST00000638372 PRPF4O43172 522 aaKnown RBP eCLIP14.76□□□□□ -0.05
SCARB2-208ENST00000638372 LYPLA2O95372 231 aa14.76□□□□□ -0.05
SCARB2-208ENST00000638372 LRG1P02750 347 aa14.76□□□□□ -0.05
SCARB2-208ENST00000638372 NME5P56597 212 aa14.76□□□□□ -0.05
SCARB2-208ENST00000638372 TAS2R40P59535 323 aa14.76□□□□□ -0.05
SCARB2-208ENST00000638372 INPP5AQ14642 412 aa14.76□□□□□ -0.05
SCARB2-208ENST00000638372 RRP1BQ14684 758 aaKnown RBP14.76□□□□□ -0.05
SCARB2-208ENST00000638372 RASA2Q15283 850 aa14.76□□□□□ -0.05
SCARB2-208ENST00000638372 KBTBD12Q3ZCT8 623 aa14.76□□□□□ -0.05
SCARB2-208ENST00000638372 N4BP2L1Q5TBK1 243 aaPredicted RBP14.76□□□□□ -0.05
SCARB2-208ENST00000638372 USP50Q70EL3 339 aaPredicted RBP14.76□□□□□ -0.05
SCARB2-208ENST00000638372 ZDHHC17Q8IUH5 632 aa14.76□□□□□ -0.05
SCARB2-208ENST00000638372 ZC3H15Q8WU90 426 aaKnown RBP14.76□□□□□ -0.05
SCARB2-208ENST00000638372 VPS28Q9UK41 221 aa14.76□□□□□ -0.05
SCARB2-208ENST00000638372 ARHGAP26Q9UNA1 814 aa14.76□□□□□ -0.05
SCARB2-208ENST00000638372 CFAP99D6REC4 459 aa14.76□□□□□ -0.05
SCARB2-208ENST00000638372 NCAM2O15394 837 aa14.76□□□□□ -0.05
SCARB2-208ENST00000638372 LTFP02788 710 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms