RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 AP5Z1O43299 807 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 GABBR2O75899 941 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 CLTBP09497 229 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 CCNYL3P0C7X3 344 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 KCNE1P15382 129 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 WARSP23381 471 aaKnown RBP5.72□□□□□ -1.49
CHD2-227ENST00000637572 ATP5C1P36542 298 aaKnown RBP5.72□□□□□ -1.49
CHD2-227ENST00000637572 PSMD5Q16401 504 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 MON1AQ86VX9 555 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 SCUBE3Q8IX30 993 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 GDAP1Q8TB36 358 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 HNRNPLLQ8WVV9 542 aaKnown RBP5.72□□□□□ -1.49
CHD2-227ENST00000637572 RMDN1Q96DB5 314 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 TSPAN17Q96FV3 270 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 PAWRQ96IZ0 340 aaKnown RBP5.72□□□□□ -1.49
CHD2-227ENST00000637572 SRPK1Q96SB4 655 aaKnown RBP5.72□□□□□ -1.49
CHD2-227ENST00000637572 WRAP73Q9P2S5 460 aaPredicted RBP5.72□□□□□ -1.49
CHD2-227ENST00000637572 TRIM10Q9UDY6 481 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 GGT7Q9UJ14 662 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 CAPN6Q9Y6Q1 641 aa5.72□□□□□ -1.49
CHD2-227ENST00000637572 IGKV6-21A0A0C4DH24 114 aa5.71□□□□□ -1.49
CHD2-227ENST00000637572 CDH16O75309 829 aa5.71□□□□□ -1.49
CHD2-227ENST00000637572 ACSL3O95573 720 aa5.71□□□□□ -1.49
CHD2-227ENST00000637572 POLBP06746 335 aa5.71□□□□□ -1.49
CHD2-227ENST00000637572 GSTA1P08263 222 aa5.71□□□□□ -1.49
CHD2-227ENST00000637572 GSTA2P09210 222 aa5.71□□□□□ -1.49
CHD2-227ENST00000637572 ZNF865P0CJ78 1059 aaPredicted RBP5.71□□□□□ -1.49
CHD2-227ENST00000637572 ACAT1P24752 427 aaKnown RBP5.71□□□□□ -1.49
CHD2-227ENST00000637572 HDAC4P56524 1084 aa5.71□□□□□ -1.49
CHD2-227ENST00000637572 FMO1Q01740 532 aa5.71□□□□□ -1.49
CHD2-227ENST00000637572 EFEMP1Q12805 493 aa5.71□□□□□ -1.49
CHD2-227ENST00000637572 BRMS1LQ5PSV4 323 aa5.71□□□□□ -1.49
CHD2-227ENST00000637572 VSIG1Q86XK7 387 aa5.71□□□□□ -1.49
CHD2-227ENST00000637572 ZC3H3Q8IXZ2 948 aaKnown RBP5.71□□□□□ -1.49
CHD2-227ENST00000637572 ZBED8Q8IZ13 594 aa5.71□□□□□ -1.49
CHD2-227ENST00000637572 CACNA2D3Q8IZS8 1091 aa5.71□□□□□ -1.49
CHD2-227ENST00000637572 C1orf127Q8N9H9 656 aa5.71□□□□□ -1.49
CHD2-227ENST00000637572 PABPC5Q96DU9 382 aaKnown RBP5.71□□□□□ -1.49
CHD2-227ENST00000637572 C16orf70Q9BSU1 422 aa5.71□□□□□ -1.49
CHD2-227ENST00000637572 LRRC1Q9BTT6 524 aa5.71□□□□□ -1.49
CHD2-227ENST00000637572 TUBB6Q9BUF5 446 aa5.71□□□□□ -1.49
CHD2-227ENST00000637572 CINPQ9BW66 212 aaPredicted RBP5.71□□□□□ -1.49
CHD2-227ENST00000637572 PLAAQ9Y263 795 aa5.71□□□□□ -1.49
CHD2-227ENST00000637572 EFR3BQ9Y2G0 817 aa5.71□□□□□ -1.49
CHD2-227ENST00000637572 USP20Q9Y2K6 914 aa5.71□□□□□ -1.49
CHD2-227ENST00000637572 NEU2Q9Y3R4 380 aa5.71□□□□□ -1.49
CHD2-227ENST00000637572 ANGPTL3Q9Y5C1 460 aa5.71□□□□□ -1.49
CHD2-227ENST00000637572 TIMM13Q9Y5L4 95 aaPredicted RBP5.71□□□□□ -1.49
CHD2-227ENST00000637572 hCG_2014768A0A024R1R8 64 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 E5RJQ4 531 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 COPEO14579 308 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 CTIFO43310 598 aaKnown RBP5.71□□□□□ -1.5
CHD2-227ENST00000637572 TLL1O43897 1013 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 DAB1O75553 588 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 SUN1O94901 812 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 TTC4O95801 387 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 APRTP07741 180 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 HMBSP08397 361 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 CYBAP13498 195 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 BDNFP23560 247 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 CDC25CP30307 473 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 SPARCL1Q14515 664 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 MORF4L2Q15014 288 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 HECTD3Q5T447 861 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 ARHGAP17Q68EM7 881 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 WDR93Q6P2C0 686 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 TTC23LQ6PF05 361 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 WDR59Q6PJI9 974 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 B3GNT9Q6UX72 402 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 LYPD8Q6UX82 237 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 CCNI2Q6ZMN8 369 aaPredicted RBP5.71□□□□□ -1.5
CHD2-227ENST00000637572 STRADAQ7RTN6 431 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 PIGZQ86VD9 579 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 DEFB106AQ8N104 65 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 ANKLE1Q8NAG6 615 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 SHISA4Q96DD7 197 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 RBM15Q96T37 977 aaKnown RBP eCLIP5.71□□□□□ -1.59e-7■□□□□ 9.3
CHD2-227ENST00000637572 PACSIN1Q9BY11 444 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 ULBP1Q9BZM6 244 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 SLC28A3Q9HAS3 691 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 PCDH9Q9HC56 1237 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 RBM12Q9NTZ6 932 aaKnown RBP5.71□□□□□ -1.5
CHD2-227ENST00000637572 COMMD8Q9NX08 183 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 CNTN3Q9P232 1028 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 ZFATQ9P243 1243 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 RCOR3Q9P2K3 495 aaPredicted RBP5.71□□□□□ -1.5
CHD2-227ENST00000637572 ADAM28Q9UKQ2 775 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 TTC7AQ9ULT0 858 aaPredicted RBP5.71□□□□□ -1.5
CHD2-227ENST00000637572 CACNA1AO00555 2505 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 MAGEB16A2A368 324 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 CIB2O75838 187 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 LCA5LO95447 670 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 CHEK2O96017 543 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 CTNNB1P35222 781 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 IFNAR2P48551 515 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 GNGT1P63211 74 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 ORC1Q13415 861 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 MAMLD1Q13495 774 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 RPS6KA2Q15349 733 aa5.71□□□□□ -1.5
CHD2-227ENST00000637572 SMTNL2Q2TAL5 461 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms