RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 EIF1ADQ8N9N8 165 aaKnown RBP10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 GLIS1Q8NBF1 620 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 FBXO22Q8NEZ5 403 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 PCDH19Q8TAB3 1148 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 GRK7Q8WTQ7 553 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 NKD2Q969F2 451 aaPredicted RBP10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 CAVIN3Q969G5 261 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 PGAP3Q96FM1 320 aaPredicted RBP10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 YME1L1Q96TA2 773 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 HERC2P3Q9BVR0 1158 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 C10orf88Q9H8K7 445 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 FAM204AQ9H8W3 233 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 ZDHHC18Q9NUE0 388 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 DDIT4Q9NX09 232 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 OSER1Q9NX31 292 aa10.39□□□□□ -0.75
CACNA1A-216ENST00000635742 A0A1W2PQH9 124 aa10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 GAS8O95995 478 aa10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 HAPLN1P10915 354 aaPredicted RBP10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 VPS41P49754 854 aa10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 FPGSQ05932 587 aa10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 DUSP4Q13115 394 aa10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 PPIGQ13427 754 aaKnown RBP eCLIP10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 MTMR3Q13615 1198 aa10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 TFDP2Q14188 446 aa10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 NOMO1Q15155 1222 aa10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 SLC9A4Q6AI14 798 aa10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 C1orf228Q6PIY5 440 aa10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 HDXQ7Z353 690 aa10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 VSIG1Q86XK7 387 aa10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 MAP7D3Q8IWC1 876 aa10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 TTC13Q8NBP0 860 aa10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 TSEN2Q8NCE0 465 aaKnown RBP10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 ZBTB9Q96C00 473 aa10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 TMEM169Q96HH4 297 aa10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 CLSTN3Q9BQT9 956 aa10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 OXCT2Q9BYC2 517 aaPredicted RBP10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 RRN3Q9NYV6 651 aa10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 CXXC1Q9P0U4 656 aaPredicted RBP10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 ASIC3Q9UHC3 531 aa10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 SCML2Q9UQR0 700 aa10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 BACE2Q9Y5Z0 518 aa10.38□□□□□ -0.75
CACNA1A-216ENST00000635742 APOL1O14791 398 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 ATP8B1O43520 1251 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 IGLV3-25P01717 112 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 LINC00271P0C7V0 271 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 ETS1P14921 441 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 GOT1P17174 413 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 ATF6P18850 670 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 IVDP26440 423 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 KLRC2P26717 231 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 OR1D2P34982 312 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 GLUD2P49448 558 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 DRG2P55039 364 aaKnown RBP10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 GDF10P55107 478 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 SMARCB1Q12824 385 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 NNTQ13423 1086 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 BTBD8Q5XKL5 378 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 KIAA1841Q6NSI8 718 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 SYDE1Q6ZW31 735 aaPredicted RBP10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 BEND5Q7L4P6 421 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 ALLCQ8N6M5 410 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 GPATCH11Q8N954 259 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 FBXO25Q8TCJ0 367 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 NTAN1Q96AB6 310 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 CSPG4P5Q96PW8 444 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 TMEM121Q9BTD3 319 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 MAK16Q9BXY0 300 aaKnown RBP10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 ABCC13Q9NSE7 274 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 SPG21Q9NZD8 308 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 IL37Q9NZH6 218 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 CWC15Q9P013 229 aaKnown RBP10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 GMIPQ9P107 970 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 PRKAG2Q9UGJ0 569 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 NUDT5Q9UKK9 219 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 HPCAL4Q9UM19 191 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 ZNF148Q9UQR1 794 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 MFHAS1Q9Y4C4 1052 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 MKI67P46013 3256 aaKnown RBP10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 PLXNA4Q9HCM2 1894 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 ZNF487B1APH4 448 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 TP73O15350 636 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 IRAK2O43187 625 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 MSI1O43347 362 aaKnown RBP10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 GJB5O95377 273 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 MAP3K6O95382 1288 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 KRT14P02533 472 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 FGBP02675 491 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 ITGAVP06756 1048 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 ZSCAN5DPP0CG00 497 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 ADRA1BP35368 520 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 PLTPP55058 493 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 EIF3EP60228 445 aaKnown RBP10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 DSG1Q02413 1049 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 SCAPQ12770 1279 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 EFHC2Q5JST6 749 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 TMEM240Q5SV17 173 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 DENND5BQ6ZUT9 1274 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 B4GALNT4Q76KP1 1039 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms