RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 PSMC3P17980 439 aa9.24□□□□□ -0.93
SMAD4-217ENST00000611848 HDCP19113 662 aa9.24□□□□□ -0.93
SMAD4-217ENST00000611848 FCARP24071 287 aa9.24□□□□□ -0.93
SMAD4-217ENST00000611848 CXCR5P32302 372 aa9.24□□□□□ -0.93
SMAD4-217ENST00000611848 PAFAH1B1P43034 410 aa9.24□□□□□ -0.93
SMAD4-217ENST00000611848 GPD2P43304 727 aa9.24□□□□□ -0.93
SMAD4-217ENST00000611848 ZXDAP98168 799 aa9.24□□□□□ -0.93
SMAD4-217ENST00000611848 ZNF268Q14587 947 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-217ENST00000611848 HECTD3Q5T447 861 aa9.24□□□□□ -0.93
SMAD4-217ENST00000611848 CCNI2Q6ZMN8 369 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-217ENST00000611848 MFSD6LQ8IWD5 586 aa9.24□□□□□ -0.93
SMAD4-217ENST00000611848 CELF5Q8N6W0 485 aaKnown RBP9.24□□□□□ -0.93
SMAD4-217ENST00000611848 TPCN2Q8NHX9 752 aa9.24□□□□□ -0.93
SMAD4-217ENST00000611848 STK32AQ8WU08 396 aa9.24□□□□□ -0.93
SMAD4-217ENST00000611848 RPP25Q9BUL9 199 aaKnown RBP9.24□□□□□ -0.93
SMAD4-217ENST00000611848 KIF9Q9HAQ2 790 aa9.24□□□□□ -0.93
SMAD4-217ENST00000611848 TRPC7Q9HCX4 862 aa9.24□□□□□ -0.93
SMAD4-217ENST00000611848 ACP6Q9NPH0 428 aa9.24□□□□□ -0.93
SMAD4-217ENST00000611848 CNGB3Q9NQW8 809 aa9.24□□□□□ -0.93
SMAD4-217ENST00000611848 TDP1Q9NUW8 608 aa9.24□□□□□ -0.93
SMAD4-217ENST00000611848 PCDHGC3Q9UN70 934 aa9.24□□□□□ -0.93
SMAD4-217ENST00000611848 C2orf78A6NCI8 922 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 HEPACAM2A8MVW5 462 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 TULP2O00295 520 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 FTCDO95954 541 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 ZBED1O96006 694 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 OAS1P00973 400 aaKnown RBP9.23□□□□□ -0.93
SMAD4-217ENST00000611848 CKMP06732 381 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 TMEM253P0C7T8 217 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 SRFP11831 508 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 CYP11B1P15538 503 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 VIPR2P41587 438 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 ACADSBP45954 432 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 TKTL1P51854 596 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 TERF2Q15554 542 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 MAP9Q49MG5 647 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 GLE1Q53GS7 698 aaKnown RBP9.23□□□□□ -0.93
SMAD4-217ENST00000611848 CCDC181Q5TID7 509 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 PM20D1Q6GTS8 502 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 CCDC70Q6NSX1 233 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 PMF1Q6P1K2 205 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 SLC47A2Q86VL8 602 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 ZNF677Q86XU0 584 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 SIX6OS1Q8N1H7 587 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 SCML4Q8N228 414 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 ARHGAP18Q8N392 663 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 ZNF276Q8N554 614 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 ARL14EPQ8N8R7 260 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-217ENST00000611848 ST13P5Q8NFI4 369 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-217ENST00000611848 EDAQ92838 391 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 KHSRPQ92945 711 aaKnown RBP eCLIP9.23□□□□□ -0.934e-6■■■■■ 27.8
SMAD4-217ENST00000611848 CYP2S1Q96SQ9 504 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 CDK5RAP1Q96SZ6 601 aaKnown RBP9.23□□□□□ -0.93
SMAD4-217ENST00000611848 KXD1Q9BQD3 176 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 LHX5Q9H2C1 402 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 VIPAS39Q9H9C1 493 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 CYLDQ9NQC7 956 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 ST7Q9NRC1 585 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 GMIPQ9P107 970 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 CEP83Q9Y592 693 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 HELZP42694 1942 aaKnown RBP9.23□□□□□ -0.93
SMAD4-217ENST00000611848 FBXO21O94952 628 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 PRAMEF12O95522 483 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 OLFM2O95897 454 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 TCF3P15923 654 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 TNFRSF8P28908 595 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 RPL34P49207 117 aaKnown RBP9.23□□□□□ -0.93
SMAD4-217ENST00000611848 GALCP54803 685 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 SLC7A9P82251 487 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 PFKPQ01813 784 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 DMTNQ08495 405 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 SIGLEC14Q08ET2 396 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 FCHO2Q0JRZ9 810 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 ADIGQ0VDE8 80 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 CASP8Q14790 479 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 TCEAL1Q15170 157 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 RPS6KA1Q15418 735 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 DENND1BQ6P3S1 775 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 VITQ6UXI7 678 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 TADA2BQ86TJ2 420 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 YAF2Q8IY57 180 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 EFCAB3Q8N7B9 438 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 KIAA1958Q8N8K9 716 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 BPIFB1Q8TDL5 484 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 UBE2Q2Q8WVN8 375 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 USP13Q92995 863 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-217ENST00000611848 MS4A14Q96JA4 679 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 PBKQ96KB5 322 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 SLC22A12Q96S37 553 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 PSMB7Q99436 277 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 LRRC1Q9BTT6 524 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 TRMT61BQ9BVS5 477 aaKnown RBP9.23□□□□□ -0.93
SMAD4-217ENST00000611848 SLC4A5Q9BY07 1137 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 PLA2G2FQ9BZM2 168 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 ULBP1Q9BZM6 244 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 SLC2A4RGQ9NR83 387 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 CLIC5Q9NZA1 410 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 TMEM59LQ9UK28 342 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 ARHGAP26Q9UNA1 814 aa9.23□□□□□ -0.93
SMAD4-217ENST00000611848 ZDBF2Q9HCK1 2354 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms