RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 TAF2Q6P1X5 1199 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.39□□□□□ -0.91
COL25A1-208ENST00000610288 POU5F2Q8N7G0 328 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 RBBP8Q99708 897 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.39□□□□□ -0.91
COL25A1-208ENST00000610288 ADAMTS13Q76LX8 1427 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 TMEM247A6NEH6 219 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 SREBF1P36956 1147 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 NAPEPLDQ6IQ20 393 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 KYAT3Q6YP21 454 aaKnown RBP9.39□□□□□ -0.91
COL25A1-208ENST00000610288 RIPOR1Q6ZS17 1223 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 LRRC71Q8N4P6 559 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 ASAP3Q8TDY4 903 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 TSPAN18Q96SJ8 248 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 NT5C1AQ9BXI3 368 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 IL1RL2Q9HB29 575 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 FAM49BQ9NUQ9 324 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 GGA3Q9NZ52 723 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 E2F8A0AVK6 867 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 TSHRP16473 764 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 GARTP22102 1010 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 FASP25445 335 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 LRPAP1P30533 357 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 NNMTP40261 264 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 ITGADQ13349 1161 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 ACVR2BQ13705 512 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 BMPR2Q13873 1038 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 COL9A3Q14050 684 aaPredicted RBP9.39□□□□□ -0.91
COL25A1-208ENST00000610288 ZNF280DQ6N043 979 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 XRRA1Q6P2D8 792 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 ZNF572Q7Z3I7 529 aaPredicted RBP9.39□□□□□ -0.91
COL25A1-208ENST00000610288 RSPH1Q8WYR4 309 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 TLCD1Q96CP7 247 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 TAAR1Q96RJ0 339 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 MED15Q96RN5 788 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 CNPY3Q9BT09 278 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 MOV10Q9HCE1 1003 aaKnown RBP9.39□□□□□ -0.91
COL25A1-208ENST00000610288 RIC8BQ9NVN3 520 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 PTTG2Q9NZH5 202 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 TJP2Q9UDY2 1190 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 ITM2BQ9Y287 266 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 IPPQ9Y573 584 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 PRR23AA6NEV1 266 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 PCP4L1A6NKN8 68 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 MEI4A8MW99 385 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 STX7O15400 261 aaKnown RBP9.39□□□□□ -0.91
COL25A1-208ENST00000610288 CLOCKO15516 846 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 GH1P01241 217 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 ALDH1A3P47895 512 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 PRKAA2P54646 552 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 TRIM25Q14258 630 aaKnown RBP9.39□□□□□ -0.91
COL25A1-208ENST00000610288 CYP4A22Q5TCH4 519 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 DENND1BQ6P3S1 775 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 TAS1R2Q8TE23 839 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 B3GALT6Q96L58 329 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 MTFR1LQ9H019 292 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 NDFIP2Q9NV92 336 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 MOSPD1Q9UJG1 213 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 TSR3Q9UJK0 312 aaKnown RBP9.39□□□□□ -0.91
COL25A1-208ENST00000610288 SHPRHQ149N8 1683 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 PGM3O95394 542 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 CHRNB3Q05901 458 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 KCNA1Q09470 495 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 PRKAA1Q13131 559 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 NR1D2Q14995 579 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 RBBP7Q16576 425 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 C2CD6Q53TS8 623 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 INTS5Q6P9B9 1019 aaKnown RBP9.38□□□□□ -0.91
COL25A1-208ENST00000610288 RBM44Q6ZP01 1051 aaKnown RBP9.38□□□□□ -0.91
COL25A1-208ENST00000610288 SZRD1Q7Z422 152 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 ELMOD1Q8N336 334 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 TDRD5Q8NAT2 981 aaKnown RBP9.38□□□□□ -0.91
COL25A1-208ENST00000610288 RDM1Q8NG50 284 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 TFB1MQ8WVM0 346 aaKnown RBP9.38□□□□□ -0.91
COL25A1-208ENST00000610288 MMTAG2Q9BU76 263 aaKnown RBP9.38□□□□□ -0.91
COL25A1-208ENST00000610288 TEX12Q9BXU0 123 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 LRRC40Q9H9A6 602 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 SLCO1B3Q9NPD5 702 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 PRDM5Q9NQX1 630 aaPredicted RBP9.38□□□□□ -0.91
COL25A1-208ENST00000610288 PRMT7Q9NVM4 692 aaPredicted RBP9.38□□□□□ -0.91
COL25A1-208ENST00000610288 TRIM17Q9Y577 477 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 RIMBP3CA6NJZ7 1639 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 RIMBP3BA6NNM3 1639 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 RIMBP3Q9UFD9 1639 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 CCDC78A2IDD5 438 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 SNTNA6NMZ2 147 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 ZNF263O14978 683 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 IL18RAPO95256 599 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 PRLP01236 227 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 CTSHP09668 335 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 MAPTP10636 758 aaKnown RBP9.38□□□□□ -0.91
COL25A1-208ENST00000610288 ZNF12P17014 697 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 TGM2P21980 687 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 GRIK1P39086 918 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 BNC1Q01954 994 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 MGAT5Q09328 741 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 TMEM62Q0P6H9 643 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 FAAP100Q0VG06 881 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 ITGA7Q13683 1181 aa9.38□□□□□ -0.91
COL25A1-208ENST00000610288 N4BP2L1Q5TBK1 243 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms