RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 GPC5P78333 572 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 PDCD2Q16342 344 aaPredicted RBP4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 SMN1Q16637 294 aaKnown RBP4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 ST3GAL2Q16842 350 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 BTBD16Q32M84 506 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 KRTAP15-1Q3LI76 137 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 TBC1D25Q3MII6 688 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 CCDC144NLQ6NUI1 221 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 MTHFD1LQ6UB35 978 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 KIRREL2Q6UWL6 708 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 NAPRTQ6XQN6 538 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 BCDIN3DQ7Z5W3 292 aaKnown RBP4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 GATAD2AQ86YP4 633 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 SFTPA1Q8IWL2 248 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 OR4N4Q8N0Y3 316 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 ANKRD42Q8N9B4 389 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 SLC22A17Q8WUG5 538 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 RSC1A1Q92681 617 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 UROC1Q96N76 676 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 DDX23Q9BUQ8 820 aaKnown RBP4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 MYH16Q9H6N6 1097 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 PRDM8Q9NQV8 689 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 SEMA4GQ9NTN9 838 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 ASB6Q9NWX5 421 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 SEMA5BQ9P283 1151 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 SLC17A6Q9P2U8 582 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 SERGEFQ9UGK8 458 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 SRP68Q9UHB9 627 aaKnown RBP4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 HERC5Q9UII4 1024 aaKnown RBP4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 PCDHB7Q9Y5E2 793 aa4.52□□□□□ -1.69
RNU6-88P-201ENST00000606801 CCDC187A0A096LP49 1063 aa4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 TCRBV5S1A1TA0A578 114 aa4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 M0QYT0 321 aa4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 QSOX1O00391 747 aa4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 TMPRSS11DO60235 418 aa4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 HNRNPCP07910 306 aaKnown RBP eCLIP4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 ALDH18A1P54886 795 aaKnown RBP4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 GORABQ5T7V8 394 aa4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 RINT1Q6NUQ1 792 aa4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 C16orf89Q6UX73 402 aa4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 GRASPQ7Z6J2 395 aaPredicted RBP4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 SLC44A2Q8IWA5 706 aaPredicted RBP4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 PNPLA1Q8N8W4 532 aa4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 TERB1Q8NA31 727 aa4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 CAGE1Q8TC20 777 aa4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 TRAPPC12Q8WVT3 735 aa4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 TBC1D5Q92609 795 aa4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 SNX18Q96RF0 628 aa4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 MECRQ9BV79 373 aa4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 CHMP4AQ9BY43 222 aa4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 MYLK2Q9H1R3 596 aa4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 VPS16Q9H269 839 aa4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 ITM2CQ9NQX7 267 aa4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 ARPP21Q9UBL0 812 aaPredicted RBP4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 TLK1Q9UKI8 766 aa4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 DAPP1Q9UN19 280 aa4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 CNTN6Q9UQ52 1028 aa4.51□□□□□ -1.69
RNU6-88P-201ENST00000606801 FAM155BO75949 473 aa4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 ACTL6BO94805 426 aa4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 ITGA2BP08514 1039 aa4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 CYP21A2P08686 494 aa4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 DGKQP52824 942 aa4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 SEMA3BQ13214 749 aa4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 GAB1Q13480 694 aa4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 AMIGO2Q86SJ2 522 aa4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 TRABD2AQ86V40 505 aa4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 CERS3Q8IU89 383 aa4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 NRSN1Q8IZ57 195 aa4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 C12orf76Q8N812 135 aaPredicted RBP4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 SPATA5Q8NB90 893 aa4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 OVCA2Q8WZ82 227 aa4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 CCT6BQ92526 530 aa4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 RILPL2Q969X0 211 aa4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 RTKNQ9BST9 563 aa4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 DUSP26Q9BV47 211 aa4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 CIPCQ9C0C6 399 aa4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 CPNE5Q9HCH3 593 aa4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 KCNK9Q9NPC2 374 aa4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 GAR1Q9NY12 217 aaKnown RBP4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 LUZP4Q9P127 313 aa4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 PCDHB2Q9Y5E7 798 aa4.5□□□□□ -1.69
RNU6-88P-201ENST00000606801 AOX1Q06278 1338 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 LRRC3CA6NJW4 275 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 C16orf96A6NNT2 1141 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 KIF28PB7ZC32 967 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 B9A039 149 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 OVOL3O00110 214 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 ORC4O43929 436 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 DHRS4L1P0CG22 281 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 TMIGD3P0DMS9 266 aaPredicted RBP4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 PEPDP12955 493 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 AKT1P31749 480 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 GALNSP34059 522 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 GSTM5P46439 218 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 RENBPP51606 427 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 PRKAA2P54646 552 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 FAM3BP58499 235 aaPredicted RBP4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 AP2B1P63010 937 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 CFHR3Q02985 330 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 TFF2Q03403 129 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms