RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 KBTBD6Q86V97 674 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 DENND1CQ8IV53 801 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 FMNL3Q8IVF7 1028 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 SCUBE3Q8IX30 993 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 KIAA2013Q8IYS2 634 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 SCML4Q8N228 414 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 TXNDC5Q8NBS9 432 aaKnown RBP11.17□□□□□ -0.62
TUBE1-210ENST00000604967 NAA15Q9BXJ9 866 aaKnown RBP11.17□□□□□ -0.62
TUBE1-210ENST00000604967 NDST4Q9H3R1 872 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 LRRC4Q9HBW1 653 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 TAB2Q9NYJ8 693 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 TMEM63CQ9P1W3 806 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 HESX1Q9UBX0 185 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 APEX2Q9UBZ4 518 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 INVSQ9Y283 1065 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 FHOD1Q9Y613 1164 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 SDK1Q7Z5N4 2213 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 GOLGA6L7A0A1B0GV03 622 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 KCNJ18B7U540 433 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 E5RJQ4 531 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 KLF8O95600 359 aaPredicted RBP11.16□□□□□ -0.62
TUBE1-210ENST00000604967 FGFR1OPO95684 399 aaKnown RBP11.16□□□□□ -0.62
TUBE1-210ENST00000604967 RALAP11233 206 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 BCKDHBP21953 392 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 SLC6A4P31645 630 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 GRIA2P42262 883 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 AMPD2Q01433 879 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 KCNJ12Q14500 433 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 FBXO43Q4G163 708 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 TCP11X2Q5H9J9 407 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 NADSYN1Q6IA69 706 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 MSANTD2Q6P1R3 559 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 SLC47A2Q86VL8 602 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 RASSF3Q86WH2 238 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 PASD1Q8IV76 773 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 FAM71AQ8IYT1 594 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 FAM160A2Q8N612 972 aaPredicted RBP11.16□□□□□ -0.62
TUBE1-210ENST00000604967 TERB1Q8NA31 727 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 MDGA1Q8NFP4 955 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 WFDC5Q8TCV5 224 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 RUBCNQ92622 972 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 CPXM1Q96SM3 734 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 BBS2Q9BXC9 721 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 MIS12Q9H081 205 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 PLCB1Q9NQ66 1216 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 CNGB3Q9NQW8 809 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 DNAJC17Q9NVM6 304 aaKnown RBP11.16□□□□□ -0.62
TUBE1-210ENST00000604967 CALCOCO1Q9P1Z2 691 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 XPO7Q9UIA9 1087 aaKnown RBP11.16□□□□□ -0.62
TUBE1-210ENST00000604967 DNAJC12Q9UKB3 198 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 MMP17Q9ULZ9 603 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 NAALADL1Q9UQQ1 740 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 NFE2L3Q9Y4A8 694 aa11.16□□□□□ -0.62
TUBE1-210ENST00000604967 A0A1W2PQF6 199 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 WASH3PC4AMC7 463 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 LTFP02788 710 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 TRIM21P19474 475 aaKnown RBP11.15□□□□□ -0.62
TUBE1-210ENST00000604967 WASP42768 502 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 TNFRSF4P43489 277 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 NRLP54845 237 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 CETN1Q12798 172 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 PDCLQ13371 301 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 EIF4EBP2Q13542 120 aaPredicted RBP11.15□□□□□ -0.62
TUBE1-210ENST00000604967 SIM2Q14190 667 aaPredicted RBP11.15□□□□□ -0.62
TUBE1-210ENST00000604967 KRT31Q15323 416 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 CCDC6Q16204 474 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 CRY1Q16526 586 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 GEN1Q17RS7 908 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 FAM133BQ5BKY9 247 aaKnown RBP11.15□□□□□ -0.62
TUBE1-210ENST00000604967 ARTNQ5T4W7 220 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 KLHDC7AQ5VTJ3 777 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 OTUD1Q5VV17 481 aaPredicted RBP11.15□□□□□ -0.62
TUBE1-210ENST00000604967 BTBD8Q5XKL5 378 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 RNF43Q68DV7 783 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 KIAA1211LQ6NV74 962 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 PRR23BQ6ZRT6 265 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 TMEM110Q86TL2 294 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 SIX6OS1Q8N1H7 587 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 ADAM32Q8TC27 787 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 ENOX1Q8TC92 643 aaKnown RBP11.15□□□□□ -0.62
TUBE1-210ENST00000604967 DQX1Q8TE96 717 aaKnown RBP11.15□□□□□ -0.62
TUBE1-210ENST00000604967 GAB3Q8WWW8 586 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 DDX1Q92499 740 aaKnown RBP11.15□□□□□ -0.62
TUBE1-210ENST00000604967 RMDN1Q96DB5 314 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 FCRL2Q96LA5 508 aaPredicted RBP11.15□□□□□ -0.62
TUBE1-210ENST00000604967 HSFY1Q96LI6 401 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 TPSD1Q9BZJ3 242 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 SLC6A17Q9H1V8 727 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 GANQ9H2C0 597 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 SMOC1Q9H4F8 434 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 CD93Q9NPY3 652 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 RXFP3Q9NSD7 469 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 FANCLQ9NW38 375 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 DEC1Q9P2X7 70 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 EBF1Q9UH73 591 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 STOML2Q9UJZ1 356 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 SLC8A2Q9UPR5 921 aa11.15□□□□□ -0.62
TUBE1-210ENST00000604967 MYO18AQ92614 2054 aaKnown RBP11.15□□□□□ -0.63
TUBE1-210ENST00000604967 TBC1D3BA6NDS4 549 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 AXIN1O15169 862 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms