RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 GNA15P30679 374 aa13.65□□□□□ -0.22
USE1-207ENST00000596136 CORO1AP31146 461 aaKnown RBP13.65□□□□□ -0.22
USE1-207ENST00000596136 ACADSBP45954 432 aa13.65□□□□□ -0.22
USE1-207ENST00000596136 KCNMA1Q12791 1236 aa13.65□□□□□ -0.22
USE1-207ENST00000596136 DMC1Q14565 340 aa13.65□□□□□ -0.22
USE1-207ENST00000596136 ARHGAP44Q17R89 818 aa13.65□□□□□ -0.22
USE1-207ENST00000596136 ANO4Q32M45 955 aa13.65□□□□□ -0.22
USE1-207ENST00000596136 DENND1BQ6P3S1 775 aa13.65□□□□□ -0.22
USE1-207ENST00000596136 BEND5Q7L4P6 421 aa13.65□□□□□ -0.22
USE1-207ENST00000596136 TMEM110Q86TL2 294 aa13.65□□□□□ -0.22
USE1-207ENST00000596136 CPXM2Q8N436 756 aa13.65□□□□□ -0.22
USE1-207ENST00000596136 NAT16Q8N8M0 369 aa13.65□□□□□ -0.22
USE1-207ENST00000596136 TERB1Q8NA31 727 aa13.65□□□□□ -0.22
USE1-207ENST00000596136 RNF139Q8WU17 664 aa13.65□□□□□ -0.22
USE1-207ENST00000596136 XPO6Q96QU8 1125 aaKnown RBP13.65□□□□□ -0.22
USE1-207ENST00000596136 BBS2Q9BXC9 721 aa13.65□□□□□ -0.22
USE1-207ENST00000596136 ACP6Q9NPH0 428 aa13.65□□□□□ -0.22
USE1-207ENST00000596136 POLR3BQ9NW08 1133 aaPredicted RBP13.65□□□□□ -0.22
USE1-207ENST00000596136 CYTH4Q9UIA0 394 aa13.65□□□□□ -0.22
USE1-207ENST00000596136 STOML2Q9UJZ1 356 aa13.65□□□□□ -0.22
USE1-207ENST00000596136 DNAJC12Q9UKB3 198 aa13.65□□□□□ -0.22
USE1-207ENST00000596136 AJAP1Q9UKB5 411 aaPredicted RBP13.65□□□□□ -0.22
USE1-207ENST00000596136 PCDHGC3Q9UN70 934 aa13.65□□□□□ -0.22
USE1-207ENST00000596136 SMG5Q9UPR3 1016 aaKnown RBP13.65□□□□□ -0.22
USE1-207ENST00000596136 NEDD8-MDP1E9PL57 170 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 FOXN3O00409 490 aaPredicted RBP13.64□□□□□ -0.23
USE1-207ENST00000596136 SART1O43290 800 aaKnown RBP13.64□□□□□ -0.23
USE1-207ENST00000596136 THAP12O43422 761 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 LATS1O95835 1130 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 IGLV3-27P01718 113 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 LTFP02788 710 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 FYNP06241 537 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 CLCN1P35523 988 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 C2orf27AQ580R0 203 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 HSP90AA4PQ58FG1 418 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 FYB2Q5VWT5 728 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 TPGS1Q6ZTW0 290 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 NUDT18Q6ZVK8 323 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 FMNL3Q8IVF7 1028 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 SCUBE3Q8IX30 993 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 FAM71AQ8IYT1 594 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 WDTC1Q8N5D0 677 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 IL17RCQ8NAC3 791 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 CLEC4CQ8WTT0 213 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 EDEM1Q92611 657 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 NAA15Q9BXJ9 866 aaKnown RBP13.64□□□□□ -0.23
USE1-207ENST00000596136 LHX5Q9H2C1 402 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 ANO10Q9NW15 660 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 HCN2Q9UL51 889 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 DMXL1Q9Y485 3027 aa13.64□□□□□ -0.23
USE1-207ENST00000596136 SDK1Q7Z5N4 2213 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 TBC1D3BA6NDS4 549 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 LRRC10BA6NIK2 292 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 PIK3R2O00459 728 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 TRIM24O15164 1050 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 APBB3O95704 486 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 HMBSP08397 361 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 SEC13P55735 322 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 KDSRQ06136 332 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 RING1Q06587 406 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 CRY1Q16526 586 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 CCDC183Q5T5S1 534 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 EMC10Q5UCC4 262 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 KLHDC7AQ5VTJ3 777 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 HEATR6Q6AI08 1181 aaKnown RBP13.63□□□□□ -0.23
USE1-207ENST00000596136 LAIR1Q6GTX8 287 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 GRAMD4Q6IC98 578 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 SASS6Q6UVJ0 657 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 RASSF3Q86WH2 238 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 DENND1CQ8IV53 801 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 GAB3Q8WWW8 586 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 AZIN2Q96A70 460 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 IRX2Q9BZI1 471 aaPredicted RBP13.63□□□□□ -0.23
USE1-207ENST00000596136 PLCB1Q9NQ66 1216 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 DNAJC17Q9NVM6 304 aaKnown RBP13.63□□□□□ -0.23
USE1-207ENST00000596136 SFMBT1Q9UHJ3 866 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 SLC27A6Q9Y2P4 619 aa13.63□□□□□ -0.23
USE1-207ENST00000596136 CEP250Q9BV73 2442 aa13.62□□□□□ -0.23
USE1-207ENST00000596136 AXIN1O15169 862 aa13.62□□□□□ -0.23
USE1-207ENST00000596136 PAPSS1O43252 624 aaPredicted RBP13.62□□□□□ -0.23
USE1-207ENST00000596136 ADAM23O75077 832 aa13.62□□□□□ -0.23
USE1-207ENST00000596136 HNRNPLP14866 589 aaKnown RBP eCLIP13.62□□□□□ -0.23
USE1-207ENST00000596136 TGM1P22735 817 aa13.62□□□□□ -0.23
USE1-207ENST00000596136 TIE1P35590 1138 aa13.62□□□□□ -0.23
USE1-207ENST00000596136 USP8P40818 1118 aa13.62□□□□□ -0.23
USE1-207ENST00000596136 PXNP49023 591 aaPredicted RBP13.62□□□□□ -0.23
USE1-207ENST00000596136 HARS2P49590 506 aaKnown RBP13.62□□□□□ -0.23
USE1-207ENST00000596136 DGKEP52429 567 aa13.62□□□□□ -0.23
USE1-207ENST00000596136 BPIFB4P59827 614 aa13.62□□□□□ -0.23
USE1-207ENST00000596136 ZNF445P59923 1031 aa13.62□□□□□ -0.23
USE1-207ENST00000596136 PTK2Q05397 1052 aa13.62□□□□□ -0.23
USE1-207ENST00000596136 SRSF5Q13243 272 aaKnown RBP13.62□□□□□ -0.23
USE1-207ENST00000596136 NNTQ13423 1086 aa13.62□□□□□ -0.23
USE1-207ENST00000596136 SIM2Q14190 667 aaPredicted RBP13.62□□□□□ -0.23
USE1-207ENST00000596136 STX1AQ16623 288 aa13.62□□□□□ -0.23
USE1-207ENST00000596136 TMEM92Q6UXU6 159 aa13.62□□□□□ -0.23
USE1-207ENST00000596136 C11orf57Q6ZUT1 292 aaPredicted RBP13.62□□□□□ -0.23
USE1-207ENST00000596136 DCLK2Q8N568 766 aa13.62□□□□□ -0.23
USE1-207ENST00000596136 ALLCQ8N6M5 410 aa13.62□□□□□ -0.23
USE1-207ENST00000596136 HHIPQ96QV1 700 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms