RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 NAGPAQ9UK23 515 aa11.8□□□□□ -0.52
PRKCSH-220ENST00000593104 PCDHA7Q9UN72 937 aa11.8□□□□□ -0.52
PRKCSH-220ENST00000593104 SCML2Q9UQR0 700 aa11.8□□□□□ -0.52
PRKCSH-220ENST00000593104 FNDC3AQ9Y2H6 1198 aaKnown RBP11.8□□□□□ -0.52
PRKCSH-220ENST00000593104 CEP295Q9C0D2 2601 aa11.8□□□□□ -0.52
PRKCSH-220ENST00000593104 ZZEF1O43149 2961 aa11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 ASS1P00966 412 aaKnown RBP11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 NR3C1P04150 777 aa11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 SYPP08247 313 aa11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 NCAM1P13591 858 aa11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 CLDN10P78369 228 aa11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 EFEMP1Q12805 493 aa11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 PKP1Q13835 747 aa11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 COL28A1Q2UY09 1125 aa11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 KMT5BQ4FZB7 885 aa11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 DCAF12L1Q5VU92 463 aa11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 FYB2Q5VWT5 728 aa11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 TMEM215Q68D42 235 aa11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 NUDT18Q6ZVK8 323 aa11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 TAS1R2Q8TE23 839 aa11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 SETD7Q8WTS6 366 aaKnown RBP11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 CYFIP2Q96F07 1278 aa11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 DUSP9Q99956 384 aaKnown RBP11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 KCTD10Q9H3F6 313 aa11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 PRDM16Q9HAZ2 1276 aa11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 COMMD8Q9NX08 183 aa11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 WSB2Q9NYS7 404 aaPredicted RBP11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 WDR35Q9P2L0 1181 aa11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 EIF2B4Q9UI10 523 aaKnown RBP11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 LSM7Q9UK45 103 aaKnown RBP11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 GPSM3Q9Y4H4 160 aa11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 PCDHB9Q9Y5E1 797 aa11.79□□□□□ -0.52
PRKCSH-220ENST00000593104 BAHCC1Q9P281 2608 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 CKAP5Q14008 2032 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 A0A1B0GVT2 93 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 KCNK3O14649 394 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 ZBTB24O43167 697 aaPredicted RBP11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 CBFA2T3O75081 653 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 YEATS4O95619 227 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 CORO1AP31146 461 aaKnown RBP11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 DPP6P42658 865 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 GCLMP48507 274 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 TPMTP51580 245 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 SNRPFP62306 86 aaKnown RBP11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 PPP3CAQ08209 521 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 ZNF234Q14588 700 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 ACAP1Q15027 740 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 ZNF423Q2M1K9 1284 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 SGSM1Q2NKQ1 1148 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 PREPLQ4J6C6 727 aaPredicted RBP11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 PPP1R26Q5T8A7 1209 aaPredicted RBP11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 TMPRSS6Q8IU80 811 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 DENND1CQ8IV53 801 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 HNRNPLLQ8WVV9 542 aaKnown RBP11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 ADAMTS14Q8WXS8 1223 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 SNX19Q92543 992 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 CRELD1Q96HD1 420 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 ZNF396Q96N95 335 aaPredicted RBP11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 HNRNPABQ99729 332 aaKnown RBP11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 GAREM1Q9H706 876 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 USP36Q9P275 1121 aaKnown RBP11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 THAP10Q9P2Z0 257 aaPredicted RBP11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 DNMT3LQ9UJW3 386 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 PCOLCE2Q9UKZ9 415 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 MAPK8IP1Q9UQF2 711 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 BTBD3Q9Y2F9 522 aa11.78□□□□□ -0.52
PRKCSH-220ENST00000593104 PVALEFA0A1B0GWK0 134 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 FAM149AA5PLN7 773 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 FAM221BA6H8Z2 402 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 K7ELQ4 463 aaPredicted RBP11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 TULP2O00295 520 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 ACTN4O43707 911 aaKnown RBP11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 CILPO75339 1184 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 PENKP01210 267 aaPredicted RBP11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 ATXN1LP0C7T5 689 aaKnown RBP11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 PRR29P0C7W0 189 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 PLA2G4AP47712 749 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 ME1P48163 572 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 CSNK1EP49674 416 aaKnown RBP11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 KIF11P52732 1056 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 COPAP53621 1224 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 CLDN6P56747 220 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 GOLGA8FQ08AF8 430 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 GOLGA8DPQ0D2H9 430 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 CCDC157Q569K6 752 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 SYCP2LQ5T4T6 812 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 RESP18Q5W5W9 173 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 UNC93AQ86WB7 457 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 RBBP8NLQ8NC74 664 aaPredicted RBP11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 CYB5D2Q8WUJ1 264 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 PAGE5Q96GU1 130 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 INTS4Q96HW7 963 aaKnown RBP11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 PIWIL1Q96J94 861 aaKnown RBP11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 ARID3AQ99856 593 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 CIPCQ9C0C6 399 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 ITM2CQ9NQX7 267 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 EXOC1Q9NV70 894 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 TOR4AQ9NXH8 423 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 FBXO10Q9UK96 956 aa11.77□□□□□ -0.53
PRKCSH-220ENST00000593104 AGO1Q9UL18 857 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms