RNA–Protein interactions for RNA: ENST00000586799.1

DNMT1-209, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-209ENST00000586799 DPH6Q7L8W6 267 aa12.4□□□□□ -0.42
DNMT1-209ENST00000586799 CCDC65Q8IXS2 484 aa12.4□□□□□ -0.42
DNMT1-209ENST00000586799 FAM181AQ8N9Y4 354 aa12.4□□□□□ -0.42
DNMT1-209ENST00000586799 CACTINQ8WUQ7 758 aaKnown RBP12.4□□□□□ -0.42
DNMT1-209ENST00000586799 FGF11Q92914 225 aa12.4□□□□□ -0.42
DNMT1-209ENST00000586799 WBP1Q96G27 269 aa12.4□□□□□ -0.42
DNMT1-209ENST00000586799 PCED1BQ96HM7 432 aa12.4□□□□□ -0.42
DNMT1-209ENST00000586799 ZNF396Q96N95 335 aaPredicted RBP12.4□□□□□ -0.42
DNMT1-209ENST00000586799 XPO6Q96QU8 1125 aaKnown RBP12.4□□□□□ -0.42
DNMT1-209ENST00000586799 HSPBP1Q9NZL4 362 aa12.4□□□□□ -0.42
DNMT1-209ENST00000586799 FTSJ1Q9UET6 329 aa12.4□□□□□ -0.42
DNMT1-209ENST00000586799 ITGA11Q9UKX5 1188 aa12.4□□□□□ -0.42
DNMT1-209ENST00000586799 ANKRD6Q9Y2G4 727 aa12.4□□□□□ -0.42
DNMT1-209ENST00000586799 ZDHHC9Q9Y397 364 aa12.4□□□□□ -0.42
DNMT1-209ENST00000586799 STON1Q9Y6Q2 735 aa12.4□□□□□ -0.42
DNMT1-209ENST00000586799 POLR2DO15514 142 aaKnown RBP12.39□□□□□ -0.43
DNMT1-209ENST00000586799 ACTN4O43707 911 aaKnown RBP12.39□□□□□ -0.43
DNMT1-209ENST00000586799 KLRC4O43908 158 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 IGLV3-19P01714 112 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 KRT19P08727 400 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 CISD3P0C7P0 127 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 TYRP14679 529 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 CCT8P50990 548 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 CACNA2D1P54289 1103 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 ASIC1P78348 528 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 RBP5P82980 135 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 TARDBPQ13148 414 aaKnown RBP eCLIP12.39□□□□□ -0.43
DNMT1-209ENST00000586799 NUMA1Q14980 2115 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 FAM26FQ5R3K3 315 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 UNC13DQ70J99 1090 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 FMNL3Q8IVF7 1028 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 SYCP3Q8IZU3 236 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 IQUBQ8NA54 791 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 IGSF8Q969P0 613 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 NUP58Q9BVL2 599 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 BBS2Q9BXC9 721 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 SEMA4CQ9C0C4 833 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 AGPAT3Q9NRZ7 376 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 TMEM30AQ9NV96 361 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 CHORDC1Q9UHD1 332 aaPredicted RBP12.39□□□□□ -0.43
DNMT1-209ENST00000586799 RCOR1Q9UKL0 485 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 PCDHGA1Q9Y5H4 931 aa12.39□□□□□ -0.43
DNMT1-209ENST00000586799 UBE4BO95155 1302 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 H0Y8X5 98 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 KIAA0391O15091 583 aaKnown RBP12.38□□□□□ -0.43
DNMT1-209ENST00000586799 WISP1O95388 367 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 IRF1P10914 325 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 YWHAQP27348 245 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 DGKGP49619 791 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 DNM1Q05193 864 aaKnown RBP12.38□□□□□ -0.43
DNMT1-209ENST00000586799 SRSF1Q07955 248 aaKnown RBP eCLIP12.38□□□□□ -0.43
DNMT1-209ENST00000586799 CCDC173Q0VFZ6 552 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 CUL4BQ13620 913 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 STARD3Q14849 445 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 HECTD3Q5T447 861 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 TPGS1Q6ZTW0 290 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 TMPRSS6Q8IU80 811 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 HSCBQ8IWL3 235 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 SPACA3Q8IXA5 215 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 GRAMD1CQ8IYS0 662 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 PDZD8Q8NEN9 1154 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 MYCBPAPQ8TBZ2 947 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 PLEKHO2Q8TD55 490 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 OVCA2Q8WZ82 227 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 SNX19Q92543 992 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 SIPA1Q96FS4 1042 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 TMEM176AQ96HP8 235 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 BLZF1Q9H2G9 400 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 CCSER2Q9H7U1 834 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 MAGEF1Q9HAY2 307 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 MARK1Q9P0L2 795 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 WDR35Q9P2L0 1181 aa12.38□□□□□ -0.43
DNMT1-209ENST00000586799 COL5A1P20908 1838 aaPredicted RBP12.38□□□□□ -0.43
DNMT1-209ENST00000586799 CBX4O00257 560 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 ENC1O14682 589 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 PAPSS1O43252 624 aaPredicted RBP12.37□□□□□ -0.43
DNMT1-209ENST00000586799 GREM1O60565 184 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 CDK4P11802 303 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 C6P13671 934 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 WARSP23381 471 aaKnown RBP12.37□□□□□ -0.43
DNMT1-209ENST00000586799 ZNF132P52740 706 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 IL9RQ01113 521 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 RHDQ02161 417 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 KCNH2Q12809 1159 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 ENPP2Q13822 863 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 TEAD4Q15561 434 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 SNRNP35Q16560 246 aaKnown RBP12.37□□□□□ -0.43
DNMT1-209ENST00000586799 INAVAQ3KP66 663 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 MDH1BQ5I0G3 518 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 KCNT1Q5JUK3 1230 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 SNX30Q5VWJ9 437 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 LAYNQ6UX15 382 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 HTR3DQ70Z44 454 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 HS2ST1Q7LGA3 356 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 WDR49Q8IV35 697 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 C12orf56Q8IXR9 622 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 NUP93Q8N1F7 819 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 KIAA0895Q8NCT3 520 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 ZNF516Q92618 1163 aa12.37□□□□□ -0.43
DNMT1-209ENST00000586799 PRCCQ92733 491 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms