RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 IRX4P78413 519 aa21.44■■□□□ 1.02
TOP3A-219ENST00000584887 COG7P83436 770 aa21.44■■□□□ 1.02
TOP3A-219ENST00000584887 CUL2Q13617 745 aa21.44■■□□□ 1.02
TOP3A-219ENST00000584887 TRIM61Q5EBN2 209 aa21.44■■□□□ 1.02
TOP3A-219ENST00000584887 DAB2IPQ5VWQ8 1189 aa21.44■■□□□ 1.02
TOP3A-219ENST00000584887 LYSMD4Q5XG99 296 aa21.44■■□□□ 1.02
TOP3A-219ENST00000584887 PSAPL1Q6NUJ1 521 aa21.44■■□□□ 1.02
TOP3A-219ENST00000584887 ANKRD52Q8NB46 1076 aa21.44■■□□□ 1.02
TOP3A-219ENST00000584887 TMEM9BQ9NQ34 198 aa21.44■■□□□ 1.02
TOP3A-219ENST00000584887 CACNA2D2Q9NY47 1150 aa21.44■■□□□ 1.02
TOP3A-219ENST00000584887 HOOK1Q9UJC3 728 aaKnown RBP21.44■■□□□ 1.02
TOP3A-219ENST00000584887 ZNF510Q9Y2H8 683 aa21.44■■□□□ 1.02
TOP3A-219ENST00000584887 RAD54BQ9Y620 910 aa21.44■■□□□ 1.02
TOP3A-219ENST00000584887 MAP1BP46821 2468 aaKnown RBP21.43■■□□□ 1.02
TOP3A-219ENST00000584887 SLC12A8A0AV02 714 aa21.43■■□□□ 1.02
TOP3A-219ENST00000584887 KCNK5O95279 499 aa21.43■■□□□ 1.02
TOP3A-219ENST00000584887 MCCD1P59942 119 aaPredicted RBP21.43■■□□□ 1.02
TOP3A-219ENST00000584887 YWHAEP62258 255 aaKnown RBP21.43■■□□□ 1.02
TOP3A-219ENST00000584887 RPL6Q02878 288 aaKnown RBP21.43■■□□□ 1.02
TOP3A-219ENST00000584887 UAP1L1Q3KQV9 507 aa21.43■■□□□ 1.02
TOP3A-219ENST00000584887 SGO2Q562F6 1265 aa21.43■■□□□ 1.02
TOP3A-219ENST00000584887 ISM2Q6H9L7 571 aa21.43■■□□□ 1.02
TOP3A-219ENST00000584887 KIAA1211LQ6NV74 962 aa21.43■■□□□ 1.02
TOP3A-219ENST00000584887 DENND1CQ8IV53 801 aa21.43■■□□□ 1.02
TOP3A-219ENST00000584887 IPO4Q8TEX9 1081 aaKnown RBP21.43■■□□□ 1.02
TOP3A-219ENST00000584887 NDRG1Q92597 394 aaKnown RBP21.43■■□□□ 1.02
TOP3A-219ENST00000584887 ULBP1Q9BZM6 244 aa21.43■■□□□ 1.02
TOP3A-219ENST00000584887 DCLK3Q9C098 648 aa21.43■■□□□ 1.02
TOP3A-219ENST00000584887 LRRC4Q9HBW1 653 aa21.43■■□□□ 1.02
TOP3A-219ENST00000584887 HESX1Q9UBX0 185 aa21.43■■□□□ 1.02
TOP3A-219ENST00000584887 STARD13Q9Y3M8 1113 aa21.43■■□□□ 1.02
TOP3A-219ENST00000584887 A0A1W2PQF6 199 aa21.42■■□□□ 1.02
TOP3A-219ENST00000584887 TULP2O00295 520 aa21.42■■□□□ 1.02
TOP3A-219ENST00000584887 PSMA7O14818 248 aa21.42■■□□□ 1.02
TOP3A-219ENST00000584887 CFIP05156 583 aa21.42■■□□□ 1.02
TOP3A-219ENST00000584887 NDUFV2P19404 249 aa21.42■■□□□ 1.02
TOP3A-219ENST00000584887 BCAT1P54687 386 aa21.42■■□□□ 1.02
TOP3A-219ENST00000584887 LRRC63Q05C16 580 aa21.42■■□□□ 1.02
TOP3A-219ENST00000584887 PDE4CQ08493 712 aa21.42■■□□□ 1.02
TOP3A-219ENST00000584887 STIM1Q13586 685 aa21.42■■□□□ 1.02
TOP3A-219ENST00000584887 COBLL1Q53SF7 1204 aa21.42■■□□□ 1.02
TOP3A-219ENST00000584887 SYT12Q8IV01 421 aa21.42■■□□□ 1.02
TOP3A-219ENST00000584887 ZNF276Q8N554 614 aa21.42■■□□□ 1.02
TOP3A-219ENST00000584887 ENGASEQ8NFI3 743 aa21.42■■□□□ 1.02
TOP3A-219ENST00000584887 IPO9Q96P70 1041 aaKnown RBP21.42■■□□□ 1.02
TOP3A-219ENST00000584887 NUSAP1Q9BXS6 441 aaKnown RBP21.42■■□□□ 1.02
TOP3A-219ENST00000584887 UBXN6Q9BZV1 441 aa21.42■■□□□ 1.02
TOP3A-219ENST00000584887 TSPAN16Q9UKR8 245 aa21.42■■□□□ 1.02
TOP3A-219ENST00000584887 CYP8B1Q9UNU6 501 aa21.42■■□□□ 1.02
TOP3A-219ENST00000584887 PI4KAP42356 2102 aa21.41■■□□□ 1.02
TOP3A-219ENST00000584887 AP5Z1O43299 807 aa21.41■■□□□ 1.02
TOP3A-219ENST00000584887 ZBED1O96006 694 aa21.41■■□□□ 1.02
TOP3A-219ENST00000584887 CISD3P0C7P0 127 aa21.41■■□□□ 1.02
TOP3A-219ENST00000584887 ITPKAP23677 461 aa21.41■■□□□ 1.02
TOP3A-219ENST00000584887 CHKAP35790 457 aa21.41■■□□□ 1.02
TOP3A-219ENST00000584887 MAPK8P45983 427 aa21.41■■□□□ 1.02
TOP3A-219ENST00000584887 NUCB2P80303 420 aa21.41■■□□□ 1.02
TOP3A-219ENST00000584887 CCDC40Q4G0X9 1142 aa21.41■■□□□ 1.02
TOP3A-219ENST00000584887 RAB41Q5JT25 222 aa21.41■■□□□ 1.02
TOP3A-219ENST00000584887 KLHL10Q6JEL2 608 aa21.41■■□□□ 1.02
TOP3A-219ENST00000584887 KIAA1324Q6UXG2 1013 aaKnown RBP21.41■■□□□ 1.02
TOP3A-219ENST00000584887 SLC36A4Q6YBV0 504 aa21.41■■□□□ 1.02
TOP3A-219ENST00000584887 ZC3H3Q8IXZ2 948 aaKnown RBP21.41■■□□□ 1.02
TOP3A-219ENST00000584887 UBA3Q8TBC4 463 aa21.41■■□□□ 1.02
TOP3A-219ENST00000584887 SLC35C1Q96A29 364 aa21.41■■□□□ 1.02
TOP3A-219ENST00000584887 P2RY11Q96G91 374 aa21.41■■□□□ 1.02
TOP3A-219ENST00000584887 GTPBP4Q9BZE4 634 aaKnown RBP21.41■■□□□ 1.02
TOP3A-219ENST00000584887 SLC6A17Q9H1V8 727 aa21.41■■□□□ 1.02
TOP3A-219ENST00000584887 FAM124BQ9H5Z6 455 aaPredicted RBP21.41■■□□□ 1.02
TOP3A-219ENST00000584887 TMEM74BQ9NUR3 256 aa21.41■■□□□ 1.02
TOP3A-219ENST00000584887 ANGPTL2Q9UKU9 493 aa21.41■■□□□ 1.02
TOP3A-219ENST00000584887 AGO1Q9UL18 857 aaKnown RBP21.41■■□□□ 1.02
TOP3A-219ENST00000584887 COQ4Q9Y3A0 265 aa21.41■■□□□ 1.02
TOP3A-219ENST00000584887 PLXND1Q9Y4D7 1925 aa21.4■■□□□ 1.02
TOP3A-219ENST00000584887 XPO1O14980 1071 aaKnown RBP21.4■■□□□ 1.02
TOP3A-219ENST00000584887 CYBBP04839 570 aa21.4■■□□□ 1.02
TOP3A-219ENST00000584887 ADIGQ0VDE8 80 aa21.4■■□□□ 1.02
TOP3A-219ENST00000584887 BST2Q10589 180 aaKnown RBP21.4■■□□□ 1.02
TOP3A-219ENST00000584887 SIX6OS1Q8N1H7 587 aa21.4■■□□□ 1.02
TOP3A-219ENST00000584887 GABRG3Q99928 467 aa21.4■■□□□ 1.02
TOP3A-219ENST00000584887 EVLQ9UI08 416 aaPredicted RBP21.4■■□□□ 1.02
TOP3A-219ENST00000584887 WASH3PC4AMC7 463 aa21.39■■□□□ 1.01
TOP3A-219ENST00000584887 GIPC1O14908 333 aa21.39■■□□□ 1.01
TOP3A-219ENST00000584887 PENKP01210 267 aaPredicted RBP21.39■■□□□ 1.01
TOP3A-219ENST00000584887 TBXAS1P24557 533 aaPredicted RBP21.39■■□□□ 1.01
TOP3A-219ENST00000584887 PMLP29590 882 aa21.39■■□□□ 1.01
TOP3A-219ENST00000584887 LMAN2Q12907 356 aa21.39■■□□□ 1.01
TOP3A-219ENST00000584887 STARD3Q14849 445 aa21.39■■□□□ 1.01
TOP3A-219ENST00000584887 SH3PXD2AQ5TCZ1 1133 aa21.39■■□□□ 1.01
TOP3A-219ENST00000584887 FYB2Q5VWT5 728 aa21.39■■□□□ 1.01
TOP3A-219ENST00000584887 RNF139Q8WU17 664 aa21.39■■□□□ 1.01
TOP3A-219ENST00000584887 EDEM1Q92611 657 aa21.39■■□□□ 1.01
TOP3A-219ENST00000584887 STON1Q9Y6Q2 735 aa21.39■■□□□ 1.01
TOP3A-219ENST00000584887 IGHV1OR15-9A0A0B4J2B8 117 aa21.38■■□□□ 1.01
TOP3A-219ENST00000584887 CDX4O14627 284 aaPredicted RBP21.38■■□□□ 1.01
TOP3A-219ENST00000584887 ZNF217O75362 1048 aa21.38■■□□□ 1.01
TOP3A-219ENST00000584887 VDRP11473 427 aa21.38■■□□□ 1.01
TOP3A-219ENST00000584887 DPP6P42658 865 aa21.38■■□□□ 1.01
TOP3A-219ENST00000584887 FMO5P49326 533 aa21.38■■□□□ 1.01
TOP3A-219ENST00000584887 MFAP3P55082 362 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms