RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 ULBP1Q9BZM6 244 aa10.2□□□□□ -0.78
TOP3A-211ENST00000581536 NACA2Q9H009 215 aa10.2□□□□□ -0.78
TOP3A-211ENST00000581536 INTS2Q9H0H0 1204 aaKnown RBP10.2□□□□□ -0.78
TOP3A-211ENST00000581536 PRM3Q9NNZ6 103 aa10.2□□□□□ -0.78
TOP3A-211ENST00000581536 UBE2TQ9NPD8 197 aaPredicted RBP10.2□□□□□ -0.78
TOP3A-211ENST00000581536 ZDHHC4Q9NPG8 344 aa10.2□□□□□ -0.78
TOP3A-211ENST00000581536 ACP6Q9NPH0 428 aa10.2□□□□□ -0.78
TOP3A-211ENST00000581536 THADAQ6YHU6 1953 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 O00370 1275 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 P4HA2O15460 535 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 SIAH2O43255 324 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 KLKB1P03952 638 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 LCP1P13796 627 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 TBXAS1P24557 533 aaPredicted RBP10.19□□□□□ -0.78
TOP3A-211ENST00000581536 BRD2P25440 801 aaKnown RBP10.19□□□□□ -0.78
TOP3A-211ENST00000581536 PLA2G4AP47712 749 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 TUBP50607 506 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 EFEMP1Q12805 493 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 PKDCCQ504Y2 493 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 C10orf120Q5SQS8 335 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 PM20D1Q6GTS8 502 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 PMF1Q6P1K2 205 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 HTR3DQ70Z44 454 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 CCDC186Q7Z3E2 898 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 MIB1Q86YT6 1006 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 MLKLQ8NB16 471 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 CLEC4CQ8WTT0 213 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 SLC35F5Q8WV83 523 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 CNOT6LQ96LI5 555 aaKnown RBP10.19□□□□□ -0.78
TOP3A-211ENST00000581536 DNAI2Q9GZS0 605 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 SEMA4AQ9H3S1 761 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 PNPLA8Q9NP80 782 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 CYLDQ9NQC7 956 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 TBC1D14Q9P2M4 693 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 SFMBT1Q9UHJ3 866 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 AJAP1Q9UKB5 411 aaPredicted RBP10.19□□□□□ -0.78
TOP3A-211ENST00000581536 PCDHGA2Q9Y5H1 932 aa10.19□□□□□ -0.78
TOP3A-211ENST00000581536 EP300Q09472 2414 aaPredicted RBP10.18□□□□□ -0.78
TOP3A-211ENST00000581536 DNAH14Q0VDD8 3507 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 TTC24A2A3L6 582 aaPredicted RBP10.18□□□□□ -0.78
TOP3A-211ENST00000581536 YJEFN3A6XGL0 299 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 E7ENQ6 273 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 SLC9A3R1O14745 358 aaPredicted RBP10.18□□□□□ -0.78
TOP3A-211ENST00000581536 XPO1O14980 1071 aaKnown RBP10.18□□□□□ -0.78
TOP3A-211ENST00000581536 STC2O76061 302 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 FGFR1OPO95684 399 aaKnown RBP10.18□□□□□ -0.78
TOP3A-211ENST00000581536 ZBED1O96006 694 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 PAEPP09466 180 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 ADH5P11766 374 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 HNRNPLP14866 589 aaKnown RBP eCLIP10.18□□□□□ -0.78
TOP3A-211ENST00000581536 MTIF2P46199 727 aaKnown RBP10.18□□□□□ -0.78
TOP3A-211ENST00000581536 NRLP54845 237 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 YWHAGP61981 247 aaKnown RBP eCLIP10.18□□□□□ -0.78
TOP3A-211ENST00000581536 YWHAEP62258 255 aaKnown RBP10.18□□□□□ -0.78
TOP3A-211ENST00000581536 PTK2Q05397 1052 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 KDSRQ06136 332 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 ADIGQ0VDE8 80 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 BST2Q10589 180 aaKnown RBP10.18□□□□□ -0.78
TOP3A-211ENST00000581536 CETN1Q12798 172 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 CNGA2Q16280 664 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 ARHGAP44Q17R89 818 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 ANO4Q32M45 955 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 ZC3H14Q6PJT7 736 aaKnown RBP10.18□□□□□ -0.78
TOP3A-211ENST00000581536 LCLAT1Q6UWP7 414 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 TPGS1Q6ZTW0 290 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 DDX42Q86XP3 938 aaKnown RBP eCLIP10.18□□□□□ -0.78
TOP3A-211ENST00000581536 PHTF2Q8N3S3 785 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 ZNF276Q8N554 614 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 CCDC33Q8N5R6 958 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 RBBP8NLQ8NC74 664 aaPredicted RBP10.18□□□□□ -0.78
TOP3A-211ENST00000581536 FAM174AQ8TBP5 190 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 EDEM1Q92611 657 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 SECISBP2LQ93073 1101 aaKnown RBP10.18□□□□□ -0.78
TOP3A-211ENST00000581536 PNKPQ96T60 521 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 IER2Q9BTL4 223 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 NUP62CLQ9H1M0 184 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 FAM124BQ9H5Z6 455 aaPredicted RBP10.18□□□□□ -0.78
TOP3A-211ENST00000581536 SPHK2Q9NRA0 654 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 SAMSN1Q9NSI8 373 aaKnown RBP10.18□□□□□ -0.78
TOP3A-211ENST00000581536 PLK2Q9NYY3 685 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 RASAL2Q9UJF2 1139 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 DNMT3LQ9UJW3 386 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 HCN2Q9UL51 889 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 KIAA1257Q9ULG3 409 aa10.18□□□□□ -0.78
TOP3A-211ENST00000581536 A0A0A0MRY4 1105 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 SLC12A8A0AV02 714 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 BECN2A8MW95 431 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 KAT7O95251 611 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 PAPSS2O95340 614 aaPredicted RBP10.17□□□□□ -0.78
TOP3A-211ENST00000581536 RALAP11233 206 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 KRT5P13647 590 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 PON1P27169 355 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 ZNF132P52740 706 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 BCAT1P54687 386 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 GCNT1Q02742 428 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 GAD2Q05329 585 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 PPP2R5DQ14738 602 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 TPD52L1Q16890 204 aaPredicted RBP10.17□□□□□ -0.78
TOP3A-211ENST00000581536 BSPRYQ5W0U4 402 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 DPY19L2P1Q6NXN4 242 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms