RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 KRT17Q04695 432 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 ORC1Q13415 861 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 IKZF1Q13422 519 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 BIRC3Q13489 604 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 CFAP221Q4G0U5 840 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 CTXN3Q4LDR2 81 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 ZNF667Q5HYK9 610 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 KLHDC7AQ5VTJ3 777 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 TCERG1LQ5VWI1 586 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 TPGS2Q68CL5 300 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 IQCEQ6IPM2 695 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 ZNF280DQ6N043 979 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 ANKRD54Q6NXT1 300 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 PDXDC1Q6P996 788 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 SARM1Q6SZW1 724 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 DSTYKQ6XUX3 929 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 SCARA5Q6ZMJ2 495 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 BHLHA9Q7RTU4 235 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 TMC7Q7Z402 723 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 TMEM150AQ86TG1 271 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 UNC93AQ86WB7 457 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 TMC8Q8IU68 726 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 FAM114A1Q8IWE2 563 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 TCEAL8Q8IYN2 117 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 B3GALNT2Q8NCR0 500 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 SMRP1Q8NCR6 262 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 APPL2Q8NEU8 664 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 CMASQ8NFW8 434 aaPredicted RBP4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 ZNF461Q8TAF7 563 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 HDAC7Q8WUI4 952 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 ASB11Q8WXH4 323 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 TFAP2BQ92481 460 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 DDX1Q92499 740 aaKnown RBP4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 MYLPFQ96A32 169 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 CRELD1Q96HD1 420 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 PCED1BQ96HM7 432 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 CDCA3Q99618 268 aaPredicted RBP4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 SYT15Q9BQS2 421 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 ACBD6Q9BR61 282 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 CRACR2AQ9BSW2 395 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 B3GNT5Q9BYG0 378 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 VPS16Q9H269 839 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 TSPY26PQ9H489 355 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 CYP3A43Q9HB55 503 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 CSNK1G1Q9HCP0 422 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 ZNF334Q9HCZ1 680 aaPredicted RBP4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 ABCB6Q9NP58 842 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 ACP6Q9NPH0 428 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 ENTPD7Q9NQZ7 604 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 CISHQ9NSE2 258 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 DDX43Q9NXZ2 648 aaKnown RBP4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 IL37Q9NZH6 218 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 GCNT4Q9P109 453 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 HSFX1Q9UBD0 423 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 APEX2Q9UBZ4 518 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 AFF4Q9UHB7 1163 aaKnown RBP4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 PUF60Q9UHX1 559 aaKnown RBP4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 DSEQ9UL01 958 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 CDH9Q9ULB4 789 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 BARX2Q9UMQ3 279 aaPredicted RBP4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 NENFQ9UMX5 172 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 SNX11Q9Y5W9 270 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 FHOD1Q9Y613 1164 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 TP53BP1Q12888 1972 aaPredicted RBP4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 PLXND1Q9Y4D7 1925 aa4.03□□□□□ -1.76
SMARCE1-215ENST00000578995 CKAP5Q14008 2032 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 NUP205Q92621 2012 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 ITIH6Q6UXX5 1313 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 SHROOM3Q8TF72 1996 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 CEP192Q8TEP8 1941 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 F8VZ95 297 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 H7C4K7 107 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 TULP2O00295 520 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 O00370 1275 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 CLDN5O00501 218 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 HUS1O60921 280 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 PHACTR2O75167 634 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 SOAT2O75908 522 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 CSPG5O95196 566 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 FGFR1OPO95684 399 aaKnown RBP4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 GLUD1P00367 558 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 GYPCP04921 128 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 SPATA31D3P0C874 917 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 HAPLN1P10915 354 aaPredicted RBP4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 CCDC130P13994 396 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 PRKCSHP14314 528 aaPredicted RBP4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 UCHL3P15374 230 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 CHRNB2P17787 502 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 PTPN1P18031 435 aaKnown RBP4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 HOXA9P31269 272 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 CCR2P41597 374 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 MAGEA11P43364 429 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 LHX1P48742 406 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 PGFP49763 221 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 CDR1P51861 262 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 CREMQ03060 361 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 LRMPQ12912 555 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 MYO1EQ12965 1108 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 TBX2Q13207 712 aaPredicted RBP4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 TRPC3Q13507 836 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms