RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 EPB41L1Q9H4G0 881 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 CAB39LQ9H9S4 337 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 TMEM216Q9P0N5 145 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 GPN3Q9UHW5 284 aaPredicted RBP7.3□□□□□ -1.24
CNOT1-216ENST00000569240 EIF2AK2P19525 551 aaKnown RBP7.3□□□□□ -1.24
CNOT1-216ENST00000569240 OGNP20774 298 aaKnown RBP7.3□□□□□ -1.24
CNOT1-216ENST00000569240 TGM2P21980 687 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 GCLMP48507 274 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 POLD2P49005 469 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 NEDD8Q15843 81 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 PADI6Q6TGC4 694 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 TMEM270Q6UE05 265 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 CNTD1Q8N815 330 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 MCFD2Q8NI22 146 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 MAGEB10Q96LZ2 347 aaPredicted RBP7.3□□□□□ -1.24
CNOT1-216ENST00000569240 ACOT9Q9Y305 439 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 STON1Q9Y6Q2 735 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 PRMT5O14744 637 aaPredicted RBP7.3□□□□□ -1.24
CNOT1-216ENST00000569240 FOXN1O15353 648 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 GPIP06744 558 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 FDPSP14324 419 aaKnown RBP7.3□□□□□ -1.24
CNOT1-216ENST00000569240 IL5RAQ01344 420 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 TNFAIP1Q13829 316 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 INTS11Q5TA45 600 aaKnown RBP7.3□□□□□ -1.24
CNOT1-216ENST00000569240 ARL10Q8N8L6 244 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 GALNT6Q8NCL4 622 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 TGFBRAP1Q8WUH2 860 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 TAMM41Q96BW9 452 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 ZNF496Q96IT1 587 aaPredicted RBP7.3□□□□□ -1.24
CNOT1-216ENST00000569240 ZNF594Q96JF6 807 aaPredicted RBP7.3□□□□□ -1.24
CNOT1-216ENST00000569240 PIGSQ96S52 555 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 OR2B2Q9GZK3 357 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 CCDC177Q9NQR7 707 aaPredicted RBP7.3□□□□□ -1.24
CNOT1-216ENST00000569240 PHF24Q9UPV7 400 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 TMCC2O75069 709 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 CSDE1O75534 798 aaKnown RBP7.3□□□□□ -1.24
CNOT1-216ENST00000569240 ITGA10O75578 1167 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 PSMD4P55036 377 aaKnown RBP7.3□□□□□ -1.24
CNOT1-216ENST00000569240 VAC14Q08AM6 782 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 TRIM28Q13263 835 aaKnown RBP7.3□□□□□ -1.24
CNOT1-216ENST00000569240 SLC12A1Q13621 1099 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 ZNF699Q32M78 642 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 TXNDC11Q6PKC3 985 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 SH3RF1Q7Z6J0 888 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 CPNE1Q99829 537 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 EHD3Q9NZN3 535 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 MTF2Q9Y483 593 aaPredicted RBP7.3□□□□□ -1.24
CNOT1-216ENST00000569240 SH3PXD2BA1X283 911 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 KCNN4O15554 427 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 UGT2B11O75310 529 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 REM1O75628 298 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 AKR1D1P51857 326 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 TRIM32Q13049 653 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 AARS2Q5JTZ9 985 aaKnown RBP7.3□□□□□ -1.24
CNOT1-216ENST00000569240 C6orf89Q6UWU4 347 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 LARGE2Q8N3Y3 721 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 TRPV1Q8NER1 839 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 FNDC8Q8TC99 324 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 HAVCR1Q96D42 359 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 HIPK3Q9H422 1215 aa7.3□□□□□ -1.24
CNOT1-216ENST00000569240 H3BMM5 538 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 H6PDO95479 791 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 APRTP07741 180 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 MYCLP12524 364 aaPredicted RBP7.29□□□□□ -1.24
CNOT1-216ENST00000569240 COX4I1P13073 169 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 ECT2LQ008S8 904 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 OVGP1Q12889 678 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 MAPK11Q15759 364 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 ZNF568Q3ZCX4 644 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 CCNYL2Q5T2Q4 361 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 FAAH2Q6GMR7 532 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 LIN54Q6MZP7 749 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 DCLK2Q8N568 766 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 FAM213AQ9BRX8 229 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 ACSS3Q9H6R3 686 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 AGAP1Q9UPQ3 857 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 CAMSAP1Q5T5Y3 1602 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 RARBP10826 455 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 BGNP21810 368 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 CAPGP40121 348 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 GSSP48637 474 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 KCNV1Q6PIU1 500 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 SPATA18Q8TC71 538 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 DCUN1D1Q96GG9 259 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 MED15Q96RN5 788 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 CDRT15Q96T59 188 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 HTATIP2Q9BUP3 242 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 C1orf21Q9H246 121 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 SP140LQ9H930 580 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 GPN1Q9HCN4 374 aaPredicted RBP7.29□□□□□ -1.24
CNOT1-216ENST00000569240 ALG13Q9NP73 1137 aaKnown RBP7.29□□□□□ -1.24
CNOT1-216ENST00000569240 LRRC4BQ9NT99 713 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 ATP7AQ04656 1500 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 SETBP1Q9Y6X0 1596 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 ZBTB39O15060 712 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 EPN2O95208 641 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 NADKO95544 446 aaPredicted RBP7.29□□□□□ -1.24
CNOT1-216ENST00000569240 RALAP11233 206 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 RORAP35398 523 aa7.29□□□□□ -1.24
CNOT1-216ENST00000569240 ACTR3P61158 418 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms