RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 SLC1A5Q15758 541 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 ZNF394Q53GI3 561 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 NBPF12Q5TAG4 269 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-250ENST00000568290 SLC9A4Q6AI14 798 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 EFCAB12Q6NXP0 572 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 DENND1BQ6P3S1 775 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 POTEAQ6S8J7 498 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 STRADAQ7RTN6 431 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 TRIM50Q86XT4 487 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 KIF2BQ8N4N8 673 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 FAM13CQ8NE31 585 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 MICAL1Q8TDZ2 1067 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 DEPDC1BQ8WUY9 529 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 STON2Q8WXE9 905 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 THOC1Q96FV9 657 aaKnown RBP7.91□□□□□ -1.14
ATXN3-250ENST00000568290 OXNAD1Q96HP4 312 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-250ENST00000568290 TNIP3Q96KP6 325 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 HSFY1Q96LI6 401 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 RILPQ96NA2 401 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 NR1H4Q96RI1 486 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-250ENST00000568290 SERPINI1Q99574 410 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 GPR20Q99678 358 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 SDCBP2Q9H190 292 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 XYLT2Q9H1B5 865 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 Q9H521 79 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 PTPRHQ9HD43 1115 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 PRDM9Q9NQV7 894 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.91□□□□□ -1.14
ATXN3-250ENST00000568290 NDUFA13Q9P0J0 144 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 ZFATQ9P243 1243 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 STX18Q9P2W9 335 aaKnown RBP7.91□□□□□ -1.14
ATXN3-250ENST00000568290 STAP1Q9ULZ2 295 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 TRIM33Q9UPN9 1127 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 CHMP2BQ9UQN3 213 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 PLLPQ9Y342 182 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 PCDHA11Q9Y5I1 949 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 BRWD3Q6RI45 1802 aa7.91□□□□□ -1.14
ATXN3-250ENST00000568290 MYH9P35579 1960 aaKnown RBP7.9□□□□□ -1.14
ATXN3-250ENST00000568290 SIP14410 1827 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 PTPRJQ12913 1337 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 TCRBV9S1A1TA0A576 114 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 UNCXA6NJT0 531 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 SDR42E2A6NKP2 422 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 C2CD4BA6NLJ0 364 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 TRIM49D1C9J1S8 452 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 GOLGA8MH3BSY2 632 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 FZD9O00144 591 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 CLGNO14967 610 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 SLC22A2O15244 555 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 GSC2O15499 205 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 FAM189A1O60320 539 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 POLBP06746 335 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 ZSCAN5DPP0CG00 497 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 CREB1P16220 341 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 ACAT1P24752 427 aaKnown RBP7.9□□□□□ -1.14
ATXN3-250ENST00000568290 ADRA1DP25100 572 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 ADSLP30566 484 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-250ENST00000568290 SSTR1P30872 391 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 GRM5P41594 1212 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 ZNF252P-AS1Q0IIN9 211 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 BST2Q10589 180 aaKnown RBP7.9□□□□□ -1.14
ATXN3-250ENST00000568290 IRF5Q13568 498 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 FRG1Q14331 258 aaKnown RBP7.9□□□□□ -1.14
ATXN3-250ENST00000568290 SPRED3Q2MJR0 410 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 KBTBD12Q3ZCT8 623 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 ATP13A4Q4VNC1 1196 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 TMEM63BQ5T3F8 832 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 GRTP1Q5TC63 336 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 CYP4A22Q5TCH4 519 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 METTL21CQ5VZV1 264 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 ARHGAP17Q68EM7 881 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 SCARA5Q6ZMJ2 495 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 C4orf50Q6ZRC1 276 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 AFAP1L2Q8N4X5 818 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 WDTC1Q8N5D0 677 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 PPM1NQ8N819 430 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 CATSPER1Q8NEC5 780 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 PRR7Q8TB68 274 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 TFB1MQ8WVM0 346 aaKnown RBP7.9□□□□□ -1.14
ATXN3-250ENST00000568290 RXFP2Q8WXD0 754 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 DCPSQ96C86 337 aaKnown RBP7.9□□□□□ -1.14
ATXN3-250ENST00000568290 NLRP4Q96MN2 994 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 OLFM3Q96PB7 478 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 TRAPPC9Q96Q05 1148 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 CAMKK2Q96RR4 588 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 SRPK1Q96SB4 655 aaKnown RBP7.9□□□□□ -1.14
ATXN3-250ENST00000568290 VAT1Q99536 393 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 EBNA1BP2Q99848 306 aaKnown RBP7.9□□□□□ -1.14
ATXN3-250ENST00000568290 HERPUD2Q9BSE4 406 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 TMEM120AQ9BXJ8 343 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 CDT1Q9H211 546 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 VTA1Q9NP79 307 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 ETNK2Q9NVF9 386 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 KLHL11Q9NVR0 708 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 DPP3Q9NY33 737 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 PCSK1NQ9UHG2 260 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 CDY2AQ9Y6F7 541 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 CDY1Q9Y6F8 540 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 GJA3Q9Y6H8 435 aa7.9□□□□□ -1.14
ATXN3-250ENST00000568290 A0A1W2PPM1 405 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms