RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 TRIM24O15164 1050 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 CYP26A1O43174 497 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 ANXA13P27216 316 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 CASRP41180 1078 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 NPTX2P47972 431 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 DGKGP49619 791 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 CDH8P55286 799 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 CLN3Q13286 438 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 PDIA5Q14554 519 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 SKIDA1Q1XH10 827 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 EARS2Q5JPH6 523 aaKnown RBP10.29□□□□□ -0.76
CAPN3-216ENST00000567071 PIK3AP1Q6ZUJ8 805 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 BRAPQ7Z569 592 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 PTRH1Q86Y79 214 aaKnown RBP10.29□□□□□ -0.76
CAPN3-216ENST00000567071 TMEM25Q86YD3 366 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 RDH13Q8NBN7 331 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 TNFRSF25Q93038 417 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 MOCOSQ96EN8 888 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 FUBP3Q96I24 572 aaKnown RBP eCLIP10.29□□□□□ -0.76
CAPN3-216ENST00000567071 CEP295NLQ96MC4 621 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 SLC46A1Q96NT5 459 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 BBS2Q9BXC9 721 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 RNF38Q9H0F5 515 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 ABCG4Q9H172 646 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 FOXP1Q9H334 677 aaPredicted RBP10.29□□□□□ -0.76
CAPN3-216ENST00000567071 ZSCAN16Q9H4T2 348 aaPredicted RBP10.29□□□□□ -0.76
CAPN3-216ENST00000567071 ZNF768Q9H5H4 540 aaKnown RBP10.29□□□□□ -0.76
CAPN3-216ENST00000567071 AASDHPPTQ9NRN7 309 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 WDR35Q9P2L0 1181 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 ANAPC2Q9UJX6 822 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 ZFHX3Q15911 3703 aa10.29□□□□□ -0.76
CAPN3-216ENST00000567071 NF1P21359 2839 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 TRAK2O60296 914 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 OPA1O60313 960 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 CACNG3O60359 315 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 OLFM2O95897 454 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 ACSL1P33121 698 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 MLLT3P42568 568 aaPredicted RBP10.28□□□□□ -0.76
CAPN3-216ENST00000567071 TXKP42681 527 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 DUSP3P51452 185 aaPredicted RBP10.28□□□□□ -0.76
CAPN3-216ENST00000567071 SKOR1P84550 965 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 DNM1Q05193 864 aaKnown RBP10.28□□□□□ -0.76
CAPN3-216ENST00000567071 MCL1Q07820 350 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 SV2CQ496J9 727 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 CFAP221Q4G0U5 840 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 SLC45A4Q5BKX6 768 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 C4orf50Q6ZRC1 276 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 DENND5BQ6ZUT9 1274 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 CATSPER3Q86XQ3 398 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 TICAM1Q8IUC6 712 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 CD302Q8IX05 232 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 ERMNQ8TAM6 284 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 GRAMD1AQ96CP6 724 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 SPATA17Q96L03 361 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 SLITRK1Q96PX8 696 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 ACBD6Q9BR61 282 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 CCSER1Q9C0I3 900 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 LHX5Q9H2C1 402 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 ADNPQ9H2P0 1102 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 POLD4Q9HCU8 107 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.28□□□□□ -0.76
CAPN3-216ENST00000567071 EVA1BQ9NVM1 165 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 ARHGAP28Q9P2N2 729 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 SATB2Q9UPW6 733 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 ATP6V1DQ9Y5K8 247 aa10.28□□□□□ -0.76
CAPN3-216ENST00000567071 ZNF840PA6NDX5 716 aa10.27□□□□□ -0.77
CAPN3-216ENST00000567071 PIRO00625 290 aa10.27□□□□□ -0.77
CAPN3-216ENST00000567071 TSPAN3O60637 253 aa10.27□□□□□ -0.77
CAPN3-216ENST00000567071 OAS1P00973 400 aaKnown RBP10.27□□□□□ -0.77
CAPN3-216ENST00000567071 SPATA31C1P0DKV0 1188 aa10.27□□□□□ -0.77
CAPN3-216ENST00000567071 TYRP14679 529 aa10.27□□□□□ -0.77
CAPN3-216ENST00000567071 MAGEA11P43364 429 aa10.27□□□□□ -0.77
CAPN3-216ENST00000567071 CEBPZQ03701 1054 aaKnown RBP10.27□□□□□ -0.77
CAPN3-216ENST00000567071 TMEM132DQ14C87 1099 aa10.27□□□□□ -0.77
CAPN3-216ENST00000567071 SHBQ15464 509 aa10.27□□□□□ -0.77
CAPN3-216ENST00000567071 INTS6LQ5JSJ4 861 aaKnown RBP10.27□□□□□ -0.77
CAPN3-216ENST00000567071 CDCP2Q5VXM1 449 aa10.27□□□□□ -0.77
CAPN3-216ENST00000567071 ZPBP2Q6X784 338 aa10.27□□□□□ -0.77
CAPN3-216ENST00000567071 KANSL1Q7Z3B3 1105 aa10.27□□□□□ -0.77
CAPN3-216ENST00000567071 BBS7Q8IWZ6 715 aa10.27□□□□□ -0.77
CAPN3-216ENST00000567071 BICD1Q96G01 975 aa10.27□□□□□ -0.77
CAPN3-216ENST00000567071 TRIM9Q9C026 710 aa10.27□□□□□ -0.77
CAPN3-216ENST00000567071 GDPD2Q9HCC8 539 aa10.27□□□□□ -0.77
CAPN3-216ENST00000567071 TFIP11Q9UBB9 837 aaKnown RBP10.27□□□□□ -0.77
CAPN3-216ENST00000567071 TJP2Q9UDY2 1190 aa10.27□□□□□ -0.77
CAPN3-216ENST00000567071 GTF3C4Q9UKN8 822 aa10.27□□□□□ -0.77
CAPN3-216ENST00000567071 NAV3Q8IVL0 2385 aa10.27□□□□□ -0.77
CAPN3-216ENST00000567071 PTPRJQ12913 1337 aa10.27□□□□□ -0.77
CAPN3-216ENST00000567071 OTOGQ6ZRI0 2925 aa10.27□□□□□ -0.77
CAPN3-216ENST00000567071 CKAP5Q14008 2032 aa10.26□□□□□ -0.77
CAPN3-216ENST00000567071 LRRK1Q38SD2 2015 aa10.26□□□□□ -0.77
CAPN3-216ENST00000567071 PLXNA2O75051 1894 aa10.26□□□□□ -0.77
CAPN3-216ENST00000567071 KPNA7A9QM74 516 aa10.26□□□□□ -0.77
CAPN3-216ENST00000567071 WNT7AO00755 349 aa10.26□□□□□ -0.77
CAPN3-216ENST00000567071 EPHX1P07099 455 aa10.26□□□□□ -0.77
CAPN3-216ENST00000567071 CD38P28907 300 aa10.26□□□□□ -0.77
CAPN3-216ENST00000567071 PCSK1P29120 753 aa10.26□□□□□ -0.77
CAPN3-216ENST00000567071 TOB1P50616 345 aaPredicted RBP10.26□□□□□ -0.77
CAPN3-216ENST00000567071 OXCT1P55809 520 aa10.26□□□□□ -0.77
CAPN3-216ENST00000567071 ARID5AQ03989 594 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms