RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 PSMD11O00231 422 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 CCRL2O00421 344 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 TOR1AO14656 332 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 GIPC1O14908 333 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 TM9SF1O15321 606 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 POLR2DO15514 142 aaKnown RBP6.48□□□□□ -1.37
PTPN9-204ENST00000564970 NOS1APO75052 506 aaPredicted RBP6.48□□□□□ -1.37
PTPN9-204ENST00000564970 PALMO75781 387 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 IDH1O75874 414 aaKnown RBP6.48□□□□□ -1.37
PTPN9-204ENST00000564970 OR7A10O76100 309 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 USP1O94782 785 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 SLITRK5O94991 958 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 LYPLA2O95372 231 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 CBX6O95503 412 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 PTTG1O95997 202 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 BCL10O95999 233 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 APOC1P02654 83 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 MCF2P10911 925 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 MYL4P12829 197 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 TGM1P22735 817 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 PON1P27169 355 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 POLR2BP30876 1174 aaKnown RBP6.48□□□□□ -1.37
PTPN9-204ENST00000564970 CAP2P40123 477 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 MTHFRP42898 656 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 ABCG1P45844 678 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 HCAR3P49019 387 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 BMXP51813 675 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 ARHGDIBP52566 201 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 AQP4P55087 323 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 PEX3P56589 373 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 RPL10AP62906 217 aaKnown RBP6.48□□□□□ -1.37
PTPN9-204ENST00000564970 MYBPC1Q00872 1141 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 KDSRQ06136 332 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 BTKQ06187 659 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 LGALS3BPQ08380 585 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 BST2Q10589 180 aaKnown RBP6.48□□□□□ -1.37
PTPN9-204ENST00000564970 TRIM32Q13049 653 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 CALCOCO2Q13137 446 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 MAPK7Q13164 816 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 DLGAP5Q15398 846 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 TLR1Q15399 786 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 TRIP10Q15642 601 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 TRIP13Q15645 432 aaPredicted RBP6.48□□□□□ -1.37
PTPN9-204ENST00000564970 GEN1Q17RS7 908 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 CLEC16AQ2KHT3 1053 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 TYSND1Q2T9J0 566 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 ZNF568Q3ZCX4 644 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 SFT2D3Q587I9 215 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 PLEKHA7Q6IQ23 1121 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 KRT80Q6KB66 452 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 ZNF544Q6NX49 715 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 PAOXQ6QHF9 649 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 UNC5DQ6UXZ4 953 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 UNC5AQ6ZN44 842 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 RAPH1Q70E73 1250 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 IKBIPQ70UQ0 350 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 OTOP3Q7RTS5 596 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 SLFN11Q7Z7L1 901 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 VPS37DQ86XT2 251 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 ARMC8Q8IUR7 673 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 RCOR2Q8IZ40 523 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 ZNF680Q8NEM1 530 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 ST13P5Q8NFI4 369 aaPredicted RBP6.48□□□□□ -1.37
PTPN9-204ENST00000564970 JPH3Q8WXH2 748 aaPredicted RBP6.48□□□□□ -1.37
PTPN9-204ENST00000564970 KRT35Q92764 455 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 SLCO2A1Q92959 643 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 NCLNQ969V3 563 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 TP53INP1Q96A56 240 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 TBC1D20Q96BZ9 403 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 C12orf43Q96C57 262 aaKnown RBP6.48□□□□□ -1.37
PTPN9-204ENST00000564970 ARHGEF26Q96DR7 871 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 SLC47A1Q96FL8 570 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 AHCYL2Q96HN2 611 aaKnown RBP6.48□□□□□ -1.37
PTPN9-204ENST00000564970 TBATAQ96M53 351 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 RIPOR3Q96MK2 946 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 DEPDC7Q96QD5 511 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 KCNK16Q96T55 309 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 KIFC3Q9BVG8 833 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 C1QTNF7Q9BXJ2 289 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 GCOM2Q9BZD3 368 aaPredicted RBP6.48□□□□□ -1.37
PTPN9-204ENST00000564970 C20orf96Q9NUD7 363 aaPredicted RBP6.48□□□□□ -1.37
PTPN9-204ENST00000564970 B3GNT2Q9NY97 397 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 KCNK4Q9NYG8 393 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 TAB2Q9NYJ8 693 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 GPRC5BQ9NZH0 403 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 EHD3Q9NZN3 535 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 KCND2Q9NZV8 630 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 WHRNQ9P202 907 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 FAM8A1Q9UBU6 413 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 TCEAL9Q9UHQ7 104 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 SERTAD1Q9UHV2 236 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 GGT7Q9UJ14 662 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 ZNF221Q9UK13 617 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 FBXO2Q9UK22 296 aaPredicted RBP6.48□□□□□ -1.37
PTPN9-204ENST00000564970 POU2F3Q9UKI9 436 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 BAG5Q9UL15 447 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 AP4B1Q9Y6B7 739 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 MYH6P13533 1939 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 PARP4Q9UKK3 1724 aaKnown RBP6.47□□□□□ -1.37
PTPN9-204ENST00000564970 DEPDC5O75140 1603 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms