RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 HIP1RO75146 1068 aa9.99□□□□□ -0.81
NEDD1-211ENST00000557454 IGHDP01880 384 aa9.99□□□□□ -0.81
NEDD1-211ENST00000557454 CISD3P0C7P0 127 aa9.99□□□□□ -0.81
NEDD1-211ENST00000557454 COL8A1P27658 744 aa9.99□□□□□ -0.81
NEDD1-211ENST00000557454 DCTP40126 519 aa9.99□□□□□ -0.81
NEDD1-211ENST00000557454 MAGEA11P43364 429 aa9.99□□□□□ -0.81
NEDD1-211ENST00000557454 DUSP3P51452 185 aaPredicted RBP9.99□□□□□ -0.81
NEDD1-211ENST00000557454 CDH8P55286 799 aa9.99□□□□□ -0.81
NEDD1-211ENST00000557454 STRN3Q13033 797 aa9.99□□□□□ -0.81
NEDD1-211ENST00000557454 ENPP2Q13822 863 aa9.99□□□□□ -0.81
NEDD1-211ENST00000557454 FOXR1Q6PIV2 292 aa9.99□□□□□ -0.81
NEDD1-211ENST00000557454 ZPBP2Q6X784 338 aa9.99□□□□□ -0.81
NEDD1-211ENST00000557454 OSTM1Q86WC4 334 aa9.99□□□□□ -0.81
NEDD1-211ENST00000557454 SKA1Q96BD8 255 aa9.99□□□□□ -0.81
NEDD1-211ENST00000557454 ATXN7L3BQ96GX2 97 aa9.99□□□□□ -0.81
NEDD1-211ENST00000557454 FUBP3Q96I24 572 aaKnown RBP eCLIP9.99□□□□□ -0.81
NEDD1-211ENST00000557454 RWDD1Q9H446 243 aaPredicted RBP9.99□□□□□ -0.81
NEDD1-211ENST00000557454 AASDHPPTQ9NRN7 309 aa9.99□□□□□ -0.81
NEDD1-211ENST00000557454 TJP2Q9UDY2 1190 aa9.99□□□□□ -0.81
NEDD1-211ENST00000557454 L1RE1Q9UN81 338 aa9.99□□□□□ -0.81
NEDD1-211ENST00000557454 RBM19Q9Y4C8 960 aaKnown RBP9.99□□□□□ -0.81
NEDD1-211ENST00000557454 AKAP9Q99996 3911 aa9.99□□□□□ -0.81
NEDD1-211ENST00000557454 TP53BP1Q12888 1972 aaPredicted RBP9.98□□□□□ -0.81
NEDD1-211ENST00000557454 A0A1W2PPC4 97 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 WNT7AO00755 349 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 WNT9AO14904 365 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 NEMFO60524 1076 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 RTN2O75298 545 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 EPHX1P07099 455 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 ADRB2P07550 413 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 RNF224P0DH78 156 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 PPP3CCP48454 512 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 NXPH1P58417 271 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 CYP4F2P78329 520 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 TAF10Q12962 218 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 ZNF234Q14588 700 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 TGIF1Q15583 401 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 ISXQ2M1V0 245 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 SV2CQ496J9 727 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 KIAA0895LQ68EN5 471 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 CLEC14AQ86T13 490 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 FAM177A1Q8N128 213 aaPredicted RBP9.98□□□□□ -0.81
NEDD1-211ENST00000557454 OR2T3Q8NH03 318 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 HPS3Q969F9 1004 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 TSPAN18Q96SJ8 248 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 FUCA2Q9BTY2 467 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 SLC4A5Q9BY07 1137 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 OSBPL2Q9H1P3 480 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 EBF2Q9HAK2 575 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 PLK2Q9NYY3 685 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 MARK1Q9P0L2 795 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 PCDHGA8Q9Y5G5 932 aa9.98□□□□□ -0.81
NEDD1-211ENST00000557454 A0A1W2PR77 199 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 FAM47DPA6NHR8 397 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 NPC1O15118 1278 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 TNFSF15O95150 251 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 ACO1P21399 889 aaKnown RBP9.97□□□□□ -0.81
NEDD1-211ENST00000557454 BDNFP23560 247 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 ANXA13P27216 316 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 RPA1P27694 616 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 CD38P28907 300 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 RXRGP48443 463 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 IFRD2Q12894 506 aaPredicted RBP9.97□□□□□ -0.81
NEDD1-211ENST00000557454 MAPK7Q13164 816 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 ZNF211Q13398 564 aaPredicted RBP9.97□□□□□ -0.81
NEDD1-211ENST00000557454 ECM1Q16610 540 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 GEN1Q17RS7 908 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 TMC6Q7Z403 805 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 ARL14Q8N4G2 192 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 HTR3CQ8WXA8 447 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 MYLPFQ96A32 169 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 MIB2Q96AX9 1013 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 BICD1Q96G01 975 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 P2RY11Q96G91 374 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 DUSP9Q99956 384 aaKnown RBP9.97□□□□□ -0.81
NEDD1-211ENST00000557454 ESYT1Q9BSJ8 1104 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 GJB4Q9NTQ9 266 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 DPP3Q9NY33 737 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 WDR35Q9P2L0 1181 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 ANAPC2Q9UJX6 822 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 PCDHGA4Q9Y5G9 962 aa9.97□□□□□ -0.81
NEDD1-211ENST00000557454 NAV3Q8IVL0 2385 aa9.96□□□□□ -0.81
NEDD1-211ENST00000557454 SPG11Q96JI7 2443 aa9.96□□□□□ -0.81
NEDD1-211ENST00000557454 RP1L1Q8IWN7 2480 aaPredicted RBP9.96□□□□□ -0.81
NEDD1-211ENST00000557454 VPS37CA5D8V6 355 aaPredicted RBP9.96□□□□□ -0.82
NEDD1-211ENST00000557454 SFI1A8K8P3 1242 aa9.96□□□□□ -0.82
NEDD1-211ENST00000557454 OGTO15294 1046 aa9.96□□□□□ -0.82
NEDD1-211ENST00000557454 NOBOXO60393 691 aa9.96□□□□□ -0.82
NEDD1-211ENST00000557454 ATP2C2O75185 946 aa9.96□□□□□ -0.82
NEDD1-211ENST00000557454 CENPBP07199 599 aaPredicted RBP9.96□□□□□ -0.82
NEDD1-211ENST00000557454 HMGB1P09429 215 aaKnown RBP9.96□□□□□ -0.82
NEDD1-211ENST00000557454 MAPTP10636 758 aaKnown RBP9.96□□□□□ -0.82
NEDD1-211ENST00000557454 PDIA3P30101 505 aaKnown RBP9.96□□□□□ -0.82
NEDD1-211ENST00000557454 PSMC1P62191 440 aaKnown RBP9.96□□□□□ -0.82
NEDD1-211ENST00000557454 NOP14P78316 857 aaKnown RBP9.96□□□□□ -0.82
NEDD1-211ENST00000557454 NR5A1Q13285 461 aa9.96□□□□□ -0.82
NEDD1-211ENST00000557454 VSTM1Q6UX27 236 aa9.96□□□□□ -0.82
NEDD1-211ENST00000557454 C4orf50Q6ZRC1 276 aa9.96□□□□□ -0.82
NEDD1-211ENST00000557454 OXR1Q8N573 874 aa9.96□□□□□ -0.82
NEDD1-211ENST00000557454 TMEM161BQ8NDZ6 487 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms