RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 GRHL2Q6ISB3 625 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 CCDC144NLQ6NUI1 221 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 TCTN3Q6NUS6 607 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 DENND1BQ6P3S1 775 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 CCDC129Q6ZRS4 1044 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 FUKQ8N0W3 1084 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 TMEM132CQ8N3T6 1108 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 D2HGDHQ8N465 521 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 PTGR2Q8N8N7 351 aaPredicted RBP4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 OSCP1Q8WVF1 389 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 NPIPB3Q92617 1050 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 STAMQ92783 540 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 NACC2Q96BF6 587 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 WDYHV1Q96HA8 205 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 GNRHR2Q96P88 292 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 OR14A2Q96R54 314 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 MNTQ99583 582 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 NPAS1Q99742 590 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 CCDC68Q9H2F9 335 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 CCDC134Q9H6E4 229 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 ZDHHC7Q9NXF8 308 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 SLC25A10Q9UBX3 287 aaPredicted RBP4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 TBC1D29Q9UFV1 150 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 KDM3AQ9Y4C1 1321 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 TCAF2A6NFQ2 919 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 FAM90A7PA6NKC0 464 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 FAM90A22PA8MWA6 464 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 FAM90A12PA8MX19 464 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 FAM90A23PA8MXZ1 464 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 NKX2-8O15522 239 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 HNRNPRO43390 633 aaKnown RBP4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 DHX16O60231 1041 aaKnown RBP4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 TIPRLO75663 272 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 FARP2O94887 1054 aaPredicted RBP4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 SCGB1D1O95968 90 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 CFIP05156 583 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 CYP3A4P08684 503 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 ACP5P13686 325 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 CHN1P15882 459 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 ALOX12P18054 663 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 GATA3P23771 443 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 EPHA8P29322 1005 aaPredicted RBP4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 GSTM5P46439 218 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 FOXL2P58012 376 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 LINC00310P59036 64 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 RNASE9P60153 205 aaKnown RBP4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 RPL15P61313 204 aaKnown RBP4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 PTP4A2Q12974 167 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 CAMK1Q14012 370 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 EIF4A2Q14240 407 aaKnown RBP4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 ZNF569Q5MCW4 686 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 DEPDC1Q5TB30 811 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 SP5Q6BEB4 398 aaPredicted RBP4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 FOXR2Q6PJQ5 311 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 ENOSF1Q7L5Y1 443 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 DTX2Q86UW9 622 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 ANKRD35Q8N283 1001 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 FSIP1Q8NA03 581 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 SUPT20HQ8NEM7 779 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 ATRIPQ8WXE1 791 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 SNX19Q92543 992 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 FAM136AQ96C01 138 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 NSUN4Q96CB9 384 aaKnown RBP4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 CTHRC1Q96CG8 243 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 RSPRY1Q96DX4 576 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 REXO5Q96IC2 774 aaKnown RBP4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 BOD1Q96IK1 185 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 PPP1R10Q96QC0 940 aaKnown RBP4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 DCLRE1CQ96SD1 692 aaKnown RBP4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 TAOK3Q9H2K8 898 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 TMEM74BQ9NUR3 256 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 CNOT7Q9UIV1 285 aaKnown RBP4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 BAG5Q9UL15 447 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 PCDHA10Q9Y5I2 948 aa4.5□□□□□ -1.69
LSM6P2-201ENST00000552208 A8MVJ9 347 aa4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 AHRRA9YTQ3 701 aa4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 TULP3O75386 442 aa4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 VNN1O95497 513 aa4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 CLEC3BP05452 202 aa4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 MYCLP12524 364 aaPredicted RBP4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 LAMP2P13473 410 aa4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 CD19P15391 556 aa4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 PSMA4P25789 261 aaKnown RBP4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 GALNSP34059 522 aa4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 THBS4P35443 961 aa4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 RGS2P41220 211 aa4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 PNPLA4P41247 253 aa4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 EIF4A1P60842 406 aaKnown RBP4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 CXADRP78310 365 aa4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 FPGSQ05932 587 aa4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 TBL3Q12788 808 aaKnown RBP4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 SEMA3BQ13214 749 aa4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 SEC23BQ15437 767 aa4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 ANKRD23Q86SG2 305 aa4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 TMEM151BQ8IW70 566 aa4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 DIS3L2Q8IYB7 885 aaKnown RBP4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 NFKBIDQ8NI38 313 aa4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 ZCCHC10Q8TBK6 192 aa4.49□□□□□ -1.69
LSM6P2-201ENST00000552208 KCNG4Q8TDN1 519 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms