RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 ACADMP11310 421 aa14.28□□□□□ -0.12
SNRPF-203ENST00000551316 PAX3P23760 479 aa14.28□□□□□ -0.12
SNRPF-203ENST00000551316 LMO2P25791 158 aa14.28□□□□□ -0.12
SNRPF-203ENST00000551316 MCM7P33993 719 aa14.28□□□□□ -0.12
SNRPF-203ENST00000551316 CCT6AP40227 531 aaKnown RBP14.28□□□□□ -0.12
SNRPF-203ENST00000551316 FOSBP53539 338 aa14.28□□□□□ -0.12
SNRPF-203ENST00000551316 RINT1Q6NUQ1 792 aa14.28□□□□□ -0.12
SNRPF-203ENST00000551316 NUDT18Q6ZVK8 323 aa14.28□□□□□ -0.12
SNRPF-203ENST00000551316 C1orf186Q6ZWK4 172 aa14.28□□□□□ -0.12
SNRPF-203ENST00000551316 LSMEM2Q8N112 164 aa14.28□□□□□ -0.12
SNRPF-203ENST00000551316 CXorf38Q8TB03 319 aa14.28□□□□□ -0.12
SNRPF-203ENST00000551316 KCNB2Q92953 911 aa14.28□□□□□ -0.12
SNRPF-203ENST00000551316 BICD1Q96G01 975 aa14.28□□□□□ -0.12
SNRPF-203ENST00000551316 NTPCRQ9BSD7 190 aaKnown RBP14.28□□□□□ -0.12
SNRPF-203ENST00000551316 A0A0B4J269 797 aa14.27□□□□□ -0.13
SNRPF-203ENST00000551316 CDRT15L2A8MXV6 281 aa14.27□□□□□ -0.13
SNRPF-203ENST00000551316 GABRDO14764 452 aa14.27□□□□□ -0.13
SNRPF-203ENST00000551316 CPLX1O14810 134 aa14.27□□□□□ -0.13
SNRPF-203ENST00000551316 OPA1O60313 960 aa14.27□□□□□ -0.13
SNRPF-203ENST00000551316 DFNA5O60443 496 aa14.27□□□□□ -0.13
SNRPF-203ENST00000551316 WT1P19544 449 aaPredicted RBP14.27□□□□□ -0.13
SNRPF-203ENST00000551316 CDC25AP30304 524 aa14.27□□□□□ -0.13
SNRPF-203ENST00000551316 POLR2BP30876 1174 aaKnown RBP14.27□□□□□ -0.13
SNRPF-203ENST00000551316 KRT2P35908 639 aa14.27□□□□□ -0.13
SNRPF-203ENST00000551316 MFAP3P55082 362 aa14.27□□□□□ -0.13
SNRPF-203ENST00000551316 RACK1P63244 317 aaKnown RBP14.27□□□□□ -0.13
SNRPF-203ENST00000551316 NOP14P78316 857 aaKnown RBP14.27□□□□□ -0.13
SNRPF-203ENST00000551316 CYP4F2P78329 520 aa14.27□□□□□ -0.13
SNRPF-203ENST00000551316 TGIF1Q15583 401 aa14.27□□□□□ -0.13
SNRPF-203ENST00000551316 TMEM215Q68D42 235 aa14.27□□□□□ -0.13
SNRPF-203ENST00000551316 SPATS2Q86XZ4 545 aaKnown RBP14.27□□□□□ -0.13
SNRPF-203ENST00000551316 KBTBD7Q8WVZ9 684 aa14.27□□□□□ -0.13
SNRPF-203ENST00000551316 HTR3CQ8WXA8 447 aa14.27□□□□□ -0.13
SNRPF-203ENST00000551316 CCNL2Q96S94 520 aaPredicted RBP14.27□□□□□ -0.13
SNRPF-203ENST00000551316 SYT15Q9BQS2 421 aa14.27□□□□□ -0.13
SNRPF-203ENST00000551316 ARHGAP9Q9BRR9 750 aa14.27□□□□□ -0.13
SNRPF-203ENST00000551316 MSTO1Q9BUK6 570 aa14.27□□□□□ -0.13
SNRPF-203ENST00000551316 SERGEFQ9UGK8 458 aa14.27□□□□□ -0.13
SNRPF-203ENST00000551316 CLEC4EQ9ULY5 219 aa14.27□□□□□ -0.13
SNRPF-203ENST00000551316 PLAAQ9Y263 795 aa14.27□□□□□ -0.13
SNRPF-203ENST00000551316 HIVEP1P15822 2718 aa14.27□□□□□ -0.13
SNRPF-203ENST00000551316 NPHP3-ACAD11A0A0J9YXS1 232 aa14.26□□□□□ -0.13
SNRPF-203ENST00000551316 PP2D1A8MPX8 630 aa14.26□□□□□ -0.13
SNRPF-203ENST00000551316 EPHX1P07099 455 aa14.26□□□□□ -0.13
SNRPF-203ENST00000551316 MYL7Q01449 175 aa14.26□□□□□ -0.13
SNRPF-203ENST00000551316 KCNJ12Q14500 433 aa14.26□□□□□ -0.13
SNRPF-203ENST00000551316 TBR1Q16650 682 aa14.26□□□□□ -0.13
SNRPF-203ENST00000551316 IGF2-ASQ6U949 168 aa14.26□□□□□ -0.13
SNRPF-203ENST00000551316 ATXN7L3BQ96GX2 97 aa14.26□□□□□ -0.13
SNRPF-203ENST00000551316 PCED1BQ96HM7 432 aa14.26□□□□□ -0.13
SNRPF-203ENST00000551316 SLC46A1Q96NT5 459 aa14.26□□□□□ -0.13
SNRPF-203ENST00000551316 XPO6Q96QU8 1125 aaKnown RBP14.26□□□□□ -0.13
SNRPF-203ENST00000551316 DUSP9Q99956 384 aaKnown RBP14.26□□□□□ -0.13
SNRPF-203ENST00000551316 SEMA3CQ99985 751 aa14.26□□□□□ -0.13
SNRPF-203ENST00000551316 WDR70Q9NW82 654 aa14.26□□□□□ -0.13
SNRPF-203ENST00000551316 FBXO10Q9UK96 956 aa14.26□□□□□ -0.13
SNRPF-203ENST00000551316 DERAQ9Y315 318 aa14.26□□□□□ -0.13
SNRPF-203ENST00000551316 C2CD2Q9Y426 696 aa14.26□□□□□ -0.13
SNRPF-203ENST00000551316 APCP25054 2843 aa14.26□□□□□ -0.13
SNRPF-203ENST00000551316 RP1P56715 2156 aa14.26□□□□□ -0.13
SNRPF-203ENST00000551316 LY6G6EA0A0G2JKS1 128 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 A0A1W2PPC4 97 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 C10orf142B7Z368 130 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 ANKRD63C9JTQ0 380 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 HNRNPDLO14979 420 aaKnown RBP14.25□□□□□ -0.13
SNRPF-203ENST00000551316 SYNCRIPO60506 623 aaKnown RBP14.25□□□□□ -0.13
SNRPF-203ENST00000551316 PPFIA2O75334 1257 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 CTDNEP1O95476 244 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 ITGB3P05106 788 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 CENPBP07199 599 aaPredicted RBP14.25□□□□□ -0.13
SNRPF-203ENST00000551316 PLS3P13797 630 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 COL8A1P27658 744 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 LIG4P49917 911 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 BCAT1P54687 386 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 CDH8P55286 799 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 NXPH1P58417 271 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 CYP27A1Q02318 531 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 GRIN1Q05586 938 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 SOWAHAQ2M3V2 549 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 KIAA0895LQ68EN5 471 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 C1orf127Q8N9H9 656 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 ZSWIM2Q8NEG5 633 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 OR2T3Q8NH03 318 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 ZNF560Q96MR9 790 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 DEPDC7Q96QD5 511 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 TSPAN18Q96SJ8 248 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 FUCA2Q9BTY2 467 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 MAGEC2Q9UBF1 373 aaPredicted RBP14.25□□□□□ -0.13
SNRPF-203ENST00000551316 ATXN7L1Q9ULK2 861 aaPredicted RBP14.25□□□□□ -0.13
SNRPF-203ENST00000551316 U3KQA8 63 aa14.25□□□□□ -0.13
SNRPF-203ENST00000551316 NOBOXO60393 691 aa14.24□□□□□ -0.13
SNRPF-203ENST00000551316 PIGRP01833 764 aa14.24□□□□□ -0.13
SNRPF-203ENST00000551316 TNFRSF8P28908 595 aa14.24□□□□□ -0.13
SNRPF-203ENST00000551316 NCKAP1LP55160 1127 aa14.24□□□□□ -0.13
SNRPF-203ENST00000551316 RPS14P62263 151 aaKnown RBP14.24□□□□□ -0.13
SNRPF-203ENST00000551316 VSTM1Q6UX27 236 aa14.24□□□□□ -0.13
SNRPF-203ENST00000551316 CRELD2Q6UXH1 353 aaPredicted RBP14.24□□□□□ -0.13
SNRPF-203ENST00000551316 TMC6Q7Z403 805 aa14.24□□□□□ -0.13
SNRPF-203ENST00000551316 SKAP1Q86WV1 359 aa14.24□□□□□ -0.13
SNRPF-203ENST00000551316 ERMNQ8TAM6 284 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms