RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 CAPZA3Q96KX2 299 aa20.98■□□□□ 0.95
CTDSP2-204ENST00000548823 CCDC94Q9BW85 323 aaPredicted RBP20.98■□□□□ 0.95
CTDSP2-204ENST00000548823 SLITRK6Q9H5Y7 841 aa20.98■□□□□ 0.95
CTDSP2-204ENST00000548823 ASAH2Q9NR71 780 aa20.98■□□□□ 0.95
CTDSP2-204ENST00000548823 AMFRQ9UKV5 643 aa20.98■□□□□ 0.95
CTDSP2-204ENST00000548823 TARSL2A2RTX5 802 aaKnown RBP20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 MEFVO15553 781 aaPredicted RBP20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 BUB1BO60566 1050 aaPredicted RBP20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 CSRP1P21291 193 aaKnown RBP20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 BRCC3P46736 316 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 ARPP19P56211 112 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 OSTNP61366 133 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 CENPCQ03188 943 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 BRD3Q15059 726 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 CCDC181Q5TID7 509 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 JADE1Q6IE81 842 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 TMEM270Q6UE05 265 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 DAAM2Q86T65 1068 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 CXorf38Q8TB03 319 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 PPP1R10Q96QC0 940 aaKnown RBP20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 PARD6BQ9BYG5 372 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 ANKZF1Q9H8Y5 726 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 OSGEPQ9NPF4 335 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 ACP6Q9NPH0 428 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 GNA15P30679 374 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 C1orf127Q8N9H9 656 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 NOA1Q8NC60 698 aaKnown RBP20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 C3orf58Q8NDZ4 430 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 ELMO3Q96BJ8 720 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 SELENOOQ9BVL4 669 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 DUSP15Q9H1R2 295 aaPredicted RBP20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 CYP3A43Q9HB55 503 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 GTSE1Q9NYZ3 720 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 SIX4Q9UIU6 781 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 ITGA11Q9UKX5 1188 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 MAFFQ9ULX9 164 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 SLC8A2Q9UPR5 921 aa20.97■□□□□ 0.95
CTDSP2-204ENST00000548823 SETXQ7Z333 2677 aaKnown RBP20.96■□□□□ 0.95
CTDSP2-204ENST00000548823 CCDC151A5D8V7 595 aa20.96■□□□□ 0.95
CTDSP2-204ENST00000548823 H7C4K7 107 aa20.96■□□□□ 0.95
CTDSP2-204ENST00000548823 ATG13O75143 517 aa20.96■□□□□ 0.95
CTDSP2-204ENST00000548823 NFICP08651 508 aa20.96■□□□□ 0.95
CTDSP2-204ENST00000548823 MCM3P25205 808 aa20.96■□□□□ 0.95
CTDSP2-204ENST00000548823 TWF1Q12792 350 aa20.96■□□□□ 0.95
CTDSP2-204ENST00000548823 TMEM132DQ14C87 1099 aa20.96■□□□□ 0.95
CTDSP2-204ENST00000548823 ZNF667Q5HYK9 610 aa20.96■□□□□ 0.95
CTDSP2-204ENST00000548823 WDR93Q6P2C0 686 aa20.96■□□□□ 0.95
CTDSP2-204ENST00000548823 PKN3Q6P5Z2 889 aa20.96■□□□□ 0.95
CTDSP2-204ENST00000548823 TTC39CQ8N584 583 aa20.96■□□□□ 0.95
CTDSP2-204ENST00000548823 SPATA4Q8NEY3 305 aa20.96■□□□□ 0.95
CTDSP2-204ENST00000548823 TTC8Q8TAM2 541 aa20.96■□□□□ 0.95
CTDSP2-204ENST00000548823 SHKBP1Q8TBC3 707 aa20.96■□□□□ 0.95
CTDSP2-204ENST00000548823 ACTRT1Q8TDG2 376 aa20.96■□□□□ 0.95
CTDSP2-204ENST00000548823 KIF12Q96FN5 646 aa20.96■□□□□ 0.95
CTDSP2-204ENST00000548823 CTTNBP2NLQ9P2B4 639 aa20.96■□□□□ 0.95
CTDSP2-204ENST00000548823 NEUROG3Q9Y4Z2 214 aa20.96■□□□□ 0.95
CTDSP2-204ENST00000548823 MIF4GDA9UHW6 222 aaKnown RBP20.95■□□□□ 0.94
CTDSP2-204ENST00000548823 ASPAP45381 313 aa20.95■□□□□ 0.94
CTDSP2-204ENST00000548823 MRPL58Q14197 206 aaKnown RBP20.95■□□□□ 0.94
CTDSP2-204ENST00000548823 GLRA4Q5JXX5 417 aa20.95■□□□□ 0.94
CTDSP2-204ENST00000548823 CCDC70Q6NSX1 233 aa20.95■□□□□ 0.94
CTDSP2-204ENST00000548823 PHF13Q86YI8 300 aaPredicted RBP20.95■□□□□ 0.94
CTDSP2-204ENST00000548823 MCOLN2Q8IZK6 566 aa20.95■□□□□ 0.94
CTDSP2-204ENST00000548823 RASGEF1CQ8N431 466 aa20.95■□□□□ 0.94
CTDSP2-204ENST00000548823 CAMKK1Q8N5S9 505 aa20.95■□□□□ 0.94
CTDSP2-204ENST00000548823 HNRNPLLQ8WVV9 542 aaKnown RBP20.95■□□□□ 0.94
CTDSP2-204ENST00000548823 ZNF653Q96CK0 615 aa20.95■□□□□ 0.94
CTDSP2-204ENST00000548823 CISHQ9NSE2 258 aa20.95■□□□□ 0.94
CTDSP2-204ENST00000548823 TTC7AQ9ULT0 858 aaPredicted RBP20.95■□□□□ 0.94
CTDSP2-204ENST00000548823 LNP1A1A4G5 178 aa20.94■□□□□ 0.94
CTDSP2-204ENST00000548823 BCLAF3A2AJT9 711 aaKnown RBP20.94■□□□□ 0.94
CTDSP2-204ENST00000548823 SYN3O14994 580 aa20.94■□□□□ 0.94
CTDSP2-204ENST00000548823 ATP8B1O43520 1251 aa20.94■□□□□ 0.94
CTDSP2-204ENST00000548823 RHOBTB1O94844 696 aa20.94■□□□□ 0.94
CTDSP2-204ENST00000548823 LSM8O95777 96 aaKnown RBP20.94■□□□□ 0.94
CTDSP2-204ENST00000548823 P4HA1P13674 534 aa20.94■□□□□ 0.94
CTDSP2-204ENST00000548823 CXCR5P32302 372 aa20.94■□□□□ 0.94
CTDSP2-204ENST00000548823 CLCN6P51797 869 aa20.94■□□□□ 0.94
CTDSP2-204ENST00000548823 NOMO3P69849 1222 aa20.94■□□□□ 0.94
CTDSP2-204ENST00000548823 CREB5Q02930 508 aa20.94■□□□□ 0.94
CTDSP2-204ENST00000548823 GLE1Q53GS7 698 aaKnown RBP20.94■□□□□ 0.94
CTDSP2-204ENST00000548823 ZNF606Q8WXB4 792 aa20.94■□□□□ 0.94
CTDSP2-204ENST00000548823 ZNF518BQ9C0D4 1074 aa20.94■□□□□ 0.94
CTDSP2-204ENST00000548823 GOLGA2P5Q9HBQ8 144 aa20.94■□□□□ 0.94
CTDSP2-204ENST00000548823 AFF4Q9UHB7 1163 aaKnown RBP20.94■□□□□ 0.94
CTDSP2-204ENST00000548823 PCDHGC3Q9UN70 934 aa20.94■□□□□ 0.94
CTDSP2-204ENST00000548823 PAEPP09466 180 aa20.93■□□□□ 0.94
CTDSP2-204ENST00000548823 RBP5P82980 135 aa20.93■□□□□ 0.94
CTDSP2-204ENST00000548823 SCARA3Q6AZY7 606 aa20.93■□□□□ 0.94
CTDSP2-204ENST00000548823 ARID3BQ8IVW6 561 aaPredicted RBP20.93■□□□□ 0.94
CTDSP2-204ENST00000548823 ZFYVE19Q96K21 471 aa20.93■□□□□ 0.94
CTDSP2-204ENST00000548823 TMEM209Q96SK2 561 aa20.93■□□□□ 0.94
CTDSP2-204ENST00000548823 PDCL3Q9H2J4 239 aa20.93■□□□□ 0.94
CTDSP2-204ENST00000548823 TMEM9BQ9NQ34 198 aa20.93■□□□□ 0.94
CTDSP2-204ENST00000548823 MSRB2Q9Y3D2 182 aa20.93■□□□□ 0.94
CTDSP2-204ENST00000548823 KIF26AQ9ULI4 1882 aaPredicted RBP20.93■□□□□ 0.94
CTDSP2-204ENST00000548823 NUP205Q92621 2012 aa20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 GCN1Q92616 2671 aaKnown RBP20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 ATG2BQ96BY7 2078 aa20.92■□□□□ 0.94
CTDSP2-204ENST00000548823 DPYSL4O14531 572 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms