RNA–Protein interactions for RNA: ENST00000546160.5

PDE4D-226, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 7,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-226ENST00000546160 RAD23BP54727 409 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 SLC12A3P55017 1021 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 RHOAP61586 193 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 KDSRQ06136 332 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 EFEMP1Q12805 493 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 KRR1Q13601 381 aaKnown RBP6.58□□□□□ -1.36
PDE4D-226ENST00000546160 GNA13Q14344 377 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 PWP2Q15269 919 aaKnown RBP6.58□□□□□ -1.36
PDE4D-226ENST00000546160 CHI3L2Q15782 390 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 CCNG2Q16589 344 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 TRIM60Q495X7 471 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 GLRA4Q5JXX5 417 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 DNAJB3Q8WWF6 145 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 VTI1BQ9UEU0 232 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 POLG2Q9UHN1 485 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 RAD51CO43502 376 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 DDHD2O94830 711 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 ARP10275 920 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 THRAP10827 490 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 GPC1P35052 558 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 HALP42357 657 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 DAB2P98082 770 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 MARC1Q5VT66 337 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 DENND1BQ6P3S1 775 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 PLEKHM3Q6ZWE6 761 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 MAGEB18Q96M61 343 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 SYT15Q9BQS2 421 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 GAKO14976 1311 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 CASTOR2A6NHX0 329 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 MYO1GB0I1T2 1018 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 ACKR2O00590 384 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 PCDH8O95206 1070 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 ALBP02768 609 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 TCF3P15923 654 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 OR1E1P30953 314 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 MAPK8P45983 427 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 TKTL1P51854 596 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.58□□□□□ -1.36
PDE4D-226ENST00000546160 ITIH4Q14624 930 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 FAM171A1Q5VUB5 890 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 SEL1L3Q68CR1 1132 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 ADCK1Q86TW2 530 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 NT5DC3Q86UY8 548 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 GSPT2Q8IYD1 628 aaKnown RBP6.58□□□□□ -1.36
PDE4D-226ENST00000546160 CENPLQ8N0S6 344 aaPredicted RBP6.58□□□□□ -1.36
PDE4D-226ENST00000546160 ZNF655Q8N720 491 aaPredicted RBP6.58□□□□□ -1.36
PDE4D-226ENST00000546160 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.58□□□□□ -1.36
PDE4D-226ENST00000546160 MIEF1Q9NQG6 463 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 MRPL17Q9NRX2 175 aaKnown RBP6.58□□□□□ -1.36
PDE4D-226ENST00000546160 SNTG2Q9NY99 539 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 RWDD3Q9Y3V2 267 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 ZNF142P52746 1687 aaPredicted RBP6.58□□□□□ -1.36
PDE4D-226ENST00000546160 CNTNAP2Q9UHC6 1331 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 XRN1Q8IZH2 1706 aaKnown RBP6.58□□□□□ -1.36
PDE4D-226ENST00000546160 SMIM22K7EJ46 135 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 GRK2P25098 689 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 CXCL9Q07325 125 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 LRRC14Q15048 493 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 TERF2Q15554 542 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 LY6KQ17RY6 165 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 DEPDC1Q5TB30 811 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 OTOP1Q7RTM1 612 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 ANKRD23Q86SG2 305 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 APLFQ8IW19 511 aaPredicted RBP6.58□□□□□ -1.36
PDE4D-226ENST00000546160 TC2NQ8N9U0 490 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 C18orf25Q96B23 403 aaPredicted RBP6.58□□□□□ -1.36
PDE4D-226ENST00000546160 OSMRQ99650 979 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 NCKIPSDQ9NZQ3 722 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 CTNNAL1Q9UBT7 734 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 SF3B1O75533 1304 aaKnown RBP eCLIP6.58□□□□□ -1.36
PDE4D-226ENST00000546160 FRMPD4Q14CM0 1322 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 TCRBV5S4A2TA0A5A2 114 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 RBAK-RBAKDNI3L0D1 243 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 PIK3CDO00329 1044 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 SGPL1O95470 568 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 MYL4P12829 197 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 CYP2F1P24903 491 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 SOX6P35712 828 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 PPM1AP35813 382 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 FXR1P51114 621 aaKnown RBP eCLIP6.58□□□□□ -1.36
PDE4D-226ENST00000546160 COPAP53621 1224 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 NOGQ13253 232 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 TCEA2Q15560 299 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 ATP6AP1LQ52LC2 224 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 BTN2A2Q8WVV5 523 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 CYGBQ8WWM9 190 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 MKL1Q969V6 931 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 LENG9Q96B70 501 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 FDXACB1Q9BRP7 624 aaPredicted RBP6.58□□□□□ -1.36
PDE4D-226ENST00000546160 CEP44Q9C0F1 390 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 TMEM245Q9H330 911 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 EFCAB1Q9HAE3 211 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 PCDH9Q9HC56 1237 aa6.58□□□□□ -1.36
PDE4D-226ENST00000546160 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.58□□□□□ -1.36
PDE4D-226ENST00000546160 MED1Q15648 1581 aaPredicted RBP6.57□□□□□ -1.36
PDE4D-226ENST00000546160 A0A087X1B8 175 aa6.57□□□□□ -1.36
PDE4D-226ENST00000546160 ADCY3O60266 1144 aa6.57□□□□□ -1.36
PDE4D-226ENST00000546160 ZNF7P17097 686 aaPredicted RBP6.57□□□□□ -1.36
PDE4D-226ENST00000546160 GRK4P32298 578 aa6.57□□□□□ -1.36
PDE4D-226ENST00000546160 PEX5P50542 639 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms