RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	PGM1	P36871	562 aa		5.89	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	NKX3-2	P78367	333 aa		5.89	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MCL1	Q07820	350 aa		5.89	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SLC5A9	Q2M3M2	681 aa		5.89	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	FBXO47	Q5MNV8	452 aa		5.89	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ARHGAP22	Q7Z5H3	698 aa		5.89	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ALYREF	Q86V81	257 aa	Known RBP	5.89	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	FAM126B	Q8IXS8	530 aa		5.89	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	BAD	Q92934	168 aa		5.89	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TTC17	Q96AE7	1141 aa		5.89	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	NSL1	Q96IY1	281 aa		5.89	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TUBGCP5	Q96RT8	1024 aa		5.89	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TMEM120A	Q9BXJ8	343 aa		5.89	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	NFKBIZ	Q9BYH8	718 aa		5.89	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	5.89	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	UVRAG	Q9P2Y5	699 aa		5.89	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PCDHB2	Q9Y5E7	798 aa		5.89	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ADAMTSL1	Q8N6G6	1762 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	FAM237B	A0A1B0GVD1	139 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783		B2RBV5	119 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	C2CD2L	O14523	706 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MED7	O43513	233 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ZNF862	O60290	1169 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	RGS20	O76081	388 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MTA2	O94776	668 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ENO1	P06733	434 aa	Known RBP	5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SPATA31D3	P0C874	917 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ARL2	P36404	184 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TAF6	P49848	677 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MFAP3	P55082	362 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	KDSR	Q06136	332 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CAPS	Q13938	189 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	UGCG	Q16739	394 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PAN2	Q504Q3	1202 aa	Known RBP	5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	IZUMO2	Q6UXV1	221 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SPATA31D4	Q6ZUB0	917 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ENOSF1	Q7L5Y1	443 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CFAP61	Q8NHU2	1237 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MAIP1	Q8WWC4	291 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SLCO2A1	Q92959	643 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	IFT43	Q96FT9	208 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	RAD9A	Q99638	391 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ELAC1	Q9H777	363 aa	Known RBP	5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ZNF395	Q9H8N7	513 aa	Predicted RBP	5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ACTL7B	Q9Y614	415 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MBLAC1	A4D2B0	266 aa	Predicted RBP	5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MAGEA13P	A6NCF6	341 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MYADML2	A6NDP7	307 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783		H3BRJ5	948 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TRAFD1	O14545	582 aa	Predicted RBP	5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TYROBP	O43914	113 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ZC3H11A	O75152	810 aa	Known RBP eCLIP	5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	LMNA	P02545	664 aa	Known RBP	5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	LYN	P07948	512 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	KIT	P10721	976 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CCNF	P41002	786 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	DYNLT1	P63172	113 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CAV1	Q03135	178 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PLD1	Q13393	1074 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CFAP157	Q5JU67	520 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PPP2R2D	Q66LE6	453 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PDE12	Q6L8Q7	609 aa	Known RBP	5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ZNF280D	Q6N043	979 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MAP4K3	Q8IVH8	894 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ZCCHC9	Q8N567	271 aa	Known RBP	5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	GATA6	Q92908	595 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TMEM121	Q9BTD3	319 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TRIM62	Q9BVG3	475 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TRIM55	Q9BYV6	548 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MANSC1	Q9H8J5	431 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CYLD	Q9NQC7	956 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MARCO	Q9UEW3	520 aa	Predicted RBP	5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SMG5	Q9UPR3	1016 aa	Known RBP	5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	DERA	Q9Y315	318 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PRPF4	O43172	522 aa	Known RBP eCLIP	5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	STK10	O94804	968 aa	Known RBP	5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	RB1	P06400	928 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MYL2	P10916	166 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CPB1	P15086	417 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	BGN	P21810	368 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	IGFBP4	P22692	258 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	KLRC2	P26717	231 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ADSS	P30520	456 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	GRM5	P41594	1212 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ARL4C	P56559	192 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	OCRL	Q01968	901 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	AP1B1	Q10567	949 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	STIL	Q15468	1287 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ZNF699	Q32M78	642 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CNPY1	Q3B7I2	92 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MCOLN2	Q8IZK6	566 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	HIPK4	Q8NE63	616 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	HELQ	Q8TDG4	1101 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SHC3	Q92529	594 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PTCD3	Q96EY7	689 aa	Known RBP	5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SCLY	Q96I15	445 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	RBM41	Q96IZ5	413 aa	Known RBP	5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ZNF184	Q99676	751 aa	Predicted RBP	5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TSSK1B	Q9BXA7	367 aa		5.88	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ST6GALNAC4	Q9H4F1	302 aa		5.88	□□□□□ -1.47

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