RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 PCDHGA8Q9Y5G5 932 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 RAD54BQ9Y620 910 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 NINQ8N4C6 2090 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 IGLV3-10A0A075B6K4 115 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 POM121BA6NF01 834 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 CLDN5O00501 218 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 MAN2B1O00754 1011 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 CEACAM4O75871 244 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 MT-CO1P00395 513 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 URODP06132 367 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 ITGA4P13612 1032 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 GABRR2P28476 465 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 CTSOP43234 321 aaPredicted RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 UQCRFS1P47985 274 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 PSEN1P49768 467 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 PLK1P53350 603 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 KRT17Q04695 432 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 TBC1D25Q3MII6 688 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 PLA2G4EQ3MJ16 856 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 MPZL3Q6UWV2 235 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 HEATR3Q7Z4Q2 680 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 NEK8Q86SG6 692 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 NAXDQ8IW45 347 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 SH3RF2Q8TEC5 729 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 RRP36Q96EU6 259 aaKnown RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 ARID3AQ99856 593 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 MRPL45Q9BRJ2 306 aaKnown RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 POLR3FQ9H1D9 316 aaPredicted RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 UBN1Q9NPG3 1134 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 TMEM9BQ9NQ34 198 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 KCNK4Q9NYG8 393 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 PARP2Q9UGN5 583 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 PPM1HQ9ULR3 514 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 RPH3AQ9Y2J0 694 aaPredicted RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 DSCAMO60469 2012 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 LRP1Q07954 4544 aaKnown RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 A0A1W2PPC4 97 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 PLK4O00444 970 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 HCRTR1O43613 425 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 ASS1P00966 412 aaKnown RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 ACAT1P24752 427 aaKnown RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 EPHA8P29322 1005 aaPredicted RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 CSF2RBP32927 897 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 EIF2B5Q13144 721 aaKnown RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 RTN1Q16799 776 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 FBXO43Q4G163 708 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 LINGO4Q6UY18 593 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 MMS22LQ6ZRQ5 1243 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 NRROSQ86YC3 692 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 CBWD2Q8IUF1 395 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 ARFGAP1Q8N6T3 406 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 IPO4Q8TEX9 1081 aaKnown RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 BOCQ9BWV1 1114 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 ZCCHC2Q9C0B9 1178 aaKnown RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 ERVMER34-1Q9H9K5 563 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 PRSS16Q9NQE7 514 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 SLCO3A1Q9UIG8 710 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 TMPRSS11EQ9UL52 423 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 DAAM1Q9Y4D1 1078 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 KCNU1A8MYU2 1149 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 F8VP50 259 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 HIP1RO75146 1068 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 TACC1O75410 805 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 GCFC2P16383 781 aaKnown RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 CDH8P55286 799 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 RPS14P62263 151 aaKnown RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 SIM1P81133 766 aaPredicted RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 TFF3Q07654 80 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 ZNF284Q2VY69 593 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 CRTC2Q53ET0 693 aaPredicted RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 TDRD10Q5VZ19 366 aaKnown RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 NECAB1Q8N987 351 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 LEMD2Q8NC56 503 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 SPPL2BQ8TCT7 592 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 KCNV2Q8TDN2 545 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 PARD3BQ8TEW8 1205 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 FCRL2Q96LA5 508 aaPredicted RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 MDFIQ99750 246 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 PRR14Q9BWN1 585 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 TRIM8Q9BZR9 551 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 C8orf33Q9H7E9 229 aaPredicted RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 ANKMY1Q9P2S6 941 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 NDRG2Q9UN36 371 aaKnown RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 KIF3AQ9Y496 699 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 LRP2P98164 4655 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 A0A1B0GVT2 93 aa1.84□□□□□ -2.11
KNL1-211ENST00000533001 OR6C75A6NL08 312 aa1.84□□□□□ -2.11
KNL1-211ENST00000533001 SKIP12755 728 aa1.84□□□□□ -2.11
KNL1-211ENST00000533001 GJB2P29033 226 aa1.84□□□□□ -2.11
KNL1-211ENST00000533001 CASP1P29466 404 aa1.84□□□□□ -2.11
KNL1-211ENST00000533001 CASP4P49662 377 aa1.84□□□□□ -2.11
KNL1-211ENST00000533001 ZNF234Q14588 700 aa1.84□□□□□ -2.11
KNL1-211ENST00000533001 CCDC178Q5BJE1 867 aa1.84□□□□□ -2.11
KNL1-211ENST00000533001 PIP5KL1Q5T9C9 394 aa1.84□□□□□ -2.11
KNL1-211ENST00000533001 SV2AQ7L0J3 742 aa1.84□□□□□ -2.11
KNL1-211ENST00000533001 HNRNPLLQ8WVV9 542 aaKnown RBP1.84□□□□□ -2.11
KNL1-211ENST00000533001 HSPA12BQ96MM6 686 aa1.84□□□□□ -2.11
KNL1-211ENST00000533001 P2RY13Q9BPV8 354 aa1.84□□□□□ -2.11
KNL1-211ENST00000533001 TOPORSQ9NS56 1045 aaPredicted RBP1.84□□□□□ -2.11
KNL1-211ENST00000533001 DDX25Q9UHL0 483 aaKnown RBP1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms