RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 EMC1Q8N766 993 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 SMG7Q92540 1137 aaKnown RBP11.64□□□□□ -0.55
PTPRK-221ENST00000532331 C12orf42Q96LP6 360 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 PPP1R36Q96LQ0 422 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 TRAF3IP3Q9Y228 551 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 LTN1O94822 1766 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 NCAM2O15394 837 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 ACRP10323 421 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 DARSP14868 501 aaKnown RBP11.64□□□□□ -0.55
PTPRK-221ENST00000532331 OR1D2P34982 312 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 GRM5P41594 1212 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 ACLYP53396 1101 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 RTP1P59025 263 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 KYNUQ16719 465 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 MARC1Q5VT66 337 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 C18orf25Q96B23 403 aaPredicted RBP11.64□□□□□ -0.55
PTPRK-221ENST00000532331 ZNF669Q96BR6 464 aaPredicted RBP11.64□□□□□ -0.55
PTPRK-221ENST00000532331 DNAJC7Q99615 494 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 MRGBPQ9NV56 204 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 RBPJLQ9UBG7 517 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 GRID1Q9ULK0 1009 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 HPSEQ9Y251 543 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 MON2Q7Z3U7 1717 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 NFICP08651 508 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 CYP2A6P11509 494 aaPredicted RBP11.64□□□□□ -0.55
PTPRK-221ENST00000532331 CD44P16070 742 aaKnown RBP11.64□□□□□ -0.55
PTPRK-221ENST00000532331 SYN1P17600 705 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 POLE2P56282 527 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 MKRN4PQ13434 485 aaPredicted RBP11.64□□□□□ -0.55
PTPRK-221ENST00000532331 KRT72Q14CN4 511 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 IRAK1BP1Q5VVH5 260 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 TTI2Q6NXR4 508 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 RIPOR3Q96MK2 946 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 POPDC2Q9HBU9 364 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 CREBZFQ9NS37 354 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 SLC27A5Q9Y2P5 690 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 SPACA6W5XKT8 324 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 GTPBP10A4D1E9 387 aaKnown RBP11.64□□□□□ -0.55
PTPRK-221ENST00000532331 IFRD1O00458 451 aaPredicted RBP11.64□□□□□ -0.55
PTPRK-221ENST00000532331 MEFVO15553 781 aaPredicted RBP11.64□□□□□ -0.55
PTPRK-221ENST00000532331 SRP72O76094 671 aaKnown RBP11.64□□□□□ -0.55
PTPRK-221ENST00000532331 GZMAP12544 262 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 PGM1P36871 562 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 MAPK9P45984 424 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 FBXL19Q6PCT2 694 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 PRUNE1Q86TP1 453 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 ZNF606Q8WXB4 792 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 STAMBPL1Q96FJ0 436 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 AHCYL2Q96HN2 611 aaKnown RBP11.64□□□□□ -0.55
PTPRK-221ENST00000532331 ULBP1Q9BZM6 244 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 EPN3Q9H201 632 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 ERVK-10P10266 1014 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 ACOX1Q15067 660 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 ERMARDQ5T6L9 678 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 ZNF697Q5TEC3 545 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 TSHZ1Q6ZSZ6 1077 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 ICA1LQ8NDH6 482 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 ERLEC1Q96DZ1 483 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 NEUROG2Q9H2A3 272 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 LNPEPQ9UIQ6 1025 aa11.64□□□□□ -0.55
PTPRK-221ENST00000532331 MYO1CO00159 1063 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 SPATA31D3P0C874 917 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 THOP1P52888 689 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 GCNT1Q02742 428 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 TLE2Q04725 743 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 ZNF268Q14587 947 aaPredicted RBP11.63□□□□□ -0.55
PTPRK-221ENST00000532331 INPP5AQ14642 412 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 RAB30Q15771 203 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 CCL14Q16627 93 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 CLEC16AQ2KHT3 1053 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 RARS2Q5T160 578 aaKnown RBP11.63□□□□□ -0.55
PTPRK-221ENST00000532331 SPATA31D4Q6ZUB0 917 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 OR9Q1Q8NGQ5 310 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 C11orf84Q9BUA3 381 aaPredicted RBP11.63□□□□□ -0.55
PTPRK-221ENST00000532331 CLPBQ9H078 707 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 C2CD2Q9Y426 696 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 PCDHA2Q9Y5H9 948 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 ENO1P06733 434 aaKnown RBP11.63□□□□□ -0.55
PTPRK-221ENST00000532331 SERPINF2P08697 491 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 EVX2Q03828 476 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 KDSRQ06136 332 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 CAMK2GQ13555 558 aaPredicted RBP11.63□□□□□ -0.55
PTPRK-221ENST00000532331 ABHD15Q6UXT9 468 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 LRP10Q7Z4F1 713 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 NPAS4Q8IUM7 802 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 DEFB106AQ8N104 65 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 LPCAT1Q8NF37 534 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 NPHS2Q9NP85 383 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 TLL2Q9Y6L7 1015 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 A0A087X0T9 212 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 F8VZ95 297 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 JCHAINP01591 159 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 FAM228BP0C875 321 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 LBX1P52954 281 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 FIGNQ5HY92 759 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 SERPINA13PQ6UXR4 307 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 SCUBE3Q8IX30 993 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 NUP93Q8N1F7 819 aa11.63□□□□□ -0.55
PTPRK-221ENST00000532331 MRPL1Q9BYD6 325 aaKnown RBP11.63□□□□□ -0.55
PTPRK-221ENST00000532331 ZCCHC2Q9C0B9 1178 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms