RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 ANKRD36BP1Q96IX9 119 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 PACSIN3Q9UKS6 424 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 BLOC1S6Q9UL45 172 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 PSME4Q14997 1843 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 KBTBD13C9JR72 458 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 COPEO14579 308 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 B4GALT5O43286 388 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 FKBP6O75344 327 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 PGK2P07205 417 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 MCCD1P59942 119 aaPredicted RBP14.7□□□□□ -0.06
USP48-213ENST00000529637 IRX4P78413 519 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 ZNF200P98182 395 aaPredicted RBP14.7□□□□□ -0.06
USP48-213ENST00000529637 NADK2Q4G0N4 442 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 KCTD6Q8NC69 237 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 TMEM134Q9H6X4 195 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 XPO7Q9UIA9 1087 aaKnown RBP14.7□□□□□ -0.06
USP48-213ENST00000529637 PCDHGA4Q9Y5G9 962 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 HEMK1Q9Y5R4 338 aaPredicted RBP14.7□□□□□ -0.06
USP48-213ENST00000529637 ADGRA2Q96PE1 1338 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 SMIM31A0A1B0GVY4 71 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 TRIM49D1C9J1S8 452 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 ATP9BO43861 1147 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 UGT1A9O60656 530 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 ITGAVP06756 1048 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 PIM1P11309 404 aaPredicted RBP14.7□□□□□ -0.06
USP48-213ENST00000529637 CDK4P11802 303 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 BMPR2Q13873 1038 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 GRAMD1BQ3KR37 738 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 PTPN20Q4JDL3 420 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 ZPBP2Q6X784 338 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 TMC7Q7Z402 723 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 UNC45BQ8IWX7 931 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.7□□□□□ -0.06
USP48-213ENST00000529637 ZFP28Q8NHY6 868 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 SLC35B2Q8TB61 432 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 E2F7Q96AV8 911 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 NIFKQ9BYG3 293 aaKnown RBP14.7□□□□□ -0.06
USP48-213ENST00000529637 GRIP2Q9C0E4 1043 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 UGT1A7Q9HAW7 530 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 UGT1A10Q9HAW8 530 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 UGT1A8Q9HAW9 530 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 FETUBQ9UGM5 382 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 SOX13Q9UN79 622 aa14.7□□□□□ -0.06
USP48-213ENST00000529637 CXorf49A8MYA2 514 aaPredicted RBP14.69□□□□□ -0.06
USP48-213ENST00000529637 MSCO60682 206 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 LSM8O95777 96 aaKnown RBP14.69□□□□□ -0.06
USP48-213ENST00000529637 INHBAP08476 426 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 CXCL8P10145 99 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 RAG1P15918 1043 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 SERPINB6P35237 376 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 CDKN2BP42772 138 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 CLCN3P51790 818 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 BTKQ06187 659 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 ZNF667Q5HYK9 610 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 KYAT3Q6YP21 454 aaKnown RBP14.69□□□□□ -0.06
USP48-213ENST00000529637 HPS6Q86YV9 775 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 CHST13Q8NET6 341 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 DNERQ8NFT8 737 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 NKD2Q969F2 451 aaPredicted RBP14.69□□□□□ -0.06
USP48-213ENST00000529637 ACO2Q99798 780 aaKnown RBP14.69□□□□□ -0.06
USP48-213ENST00000529637 DDX56Q9NY93 547 aaKnown RBP14.69□□□□□ -0.06
USP48-213ENST00000529637 ADAMTS5Q9UNA0 930 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 IQANK1A0A1B0GTG1 560 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 I3L4J1 428 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 PROCP04070 461 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 MAGEA8P43361 318 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 YWHAGP61981 247 aaKnown RBP eCLIP14.69□□□□□ -0.06
USP48-213ENST00000529637 CDO1Q16878 200 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 HSDL1Q3SXM5 330 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 ANKRD20A4Q4UJ75 823 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 APOBEC3FQ8IUX4 373 aaKnown RBP14.69□□□□□ -0.06
USP48-213ENST00000529637 WDTC1Q8N5D0 677 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 SLC44A1Q8WWI5 657 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 C12orf42Q96LP6 360 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 IQCGQ9H095 443 aaKnown RBP14.69□□□□□ -0.06
USP48-213ENST00000529637 WWP1Q9H0M0 922 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 BTBD7Q9P203 1132 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 IKBKGQ9Y6K9 419 aa14.69□□□□□ -0.06
USP48-213ENST00000529637 COL11A1P12107 1806 aaPredicted RBP14.69□□□□□ -0.06
USP48-213ENST00000529637 WDR81Q562E7 1941 aa14.68□□□□□ -0.06
USP48-213ENST00000529637 ZMPSTE24O75844 475 aa14.68□□□□□ -0.06
USP48-213ENST00000529637 CD48P09326 243 aa14.68□□□□□ -0.06
USP48-213ENST00000529637 RGS2P41220 211 aa14.68□□□□□ -0.06
USP48-213ENST00000529637 BAG6P46379 1132 aa14.68□□□□□ -0.06
USP48-213ENST00000529637 ZNF132P52740 706 aa14.68□□□□□ -0.06
USP48-213ENST00000529637 AP3M2P53677 418 aa14.68□□□□□ -0.06
USP48-213ENST00000529637 TMED1Q13445 227 aa14.68□□□□□ -0.06
USP48-213ENST00000529637 TEX44Q53QW1 395 aa14.68□□□□□ -0.06
USP48-213ENST00000529637 ATF7IP2Q5U623 682 aa14.68□□□□□ -0.06
USP48-213ENST00000529637 EEF1DP3Q658K8 133 aa14.68□□□□□ -0.06
USP48-213ENST00000529637 ADGRG6Q86SQ4 1221 aa14.68□□□□□ -0.06
USP48-213ENST00000529637 CTAGE3PQ8IX95 158 aa14.68□□□□□ -0.06
USP48-213ENST00000529637 FAM71DQ8N9W8 422 aa14.68□□□□□ -0.06
USP48-213ENST00000529637 TRIM56Q9BRZ2 755 aaKnown RBP14.68□□□□□ -0.06
USP48-213ENST00000529637 APOL6Q9BWW8 343 aa14.68□□□□□ -0.06
USP48-213ENST00000529637 PTTG2Q9NZH5 202 aa14.68□□□□□ -0.06
USP48-213ENST00000529637 CNTN6Q9UQ52 1028 aa14.68□□□□□ -0.06
USP48-213ENST00000529637 E7ESA3 106 aa14.68□□□□□ -0.06
USP48-213ENST00000529637 MAFO75444 373 aaPredicted RBP14.68□□□□□ -0.06
USP48-213ENST00000529637 LYPLA1O75608 230 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms