RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 DGKEP52429 567 aa11.68□□□□□ -0.54
NR1H3-230ENST00000527949 BYSLQ13895 437 aaKnown RBP11.68□□□□□ -0.54
NR1H3-230ENST00000527949 CNGA2Q16280 664 aa11.68□□□□□ -0.54
NR1H3-230ENST00000527949 ZNF394Q53GI3 561 aa11.68□□□□□ -0.54
NR1H3-230ENST00000527949 LRSAM1Q6UWE0 723 aa11.68□□□□□ -0.54
NR1H3-230ENST00000527949 LCLAT1Q6UWP7 414 aa11.68□□□□□ -0.54
NR1H3-230ENST00000527949 CLEC17AQ6ZS10 378 aa11.68□□□□□ -0.54
NR1H3-230ENST00000527949 TRMT11Q7Z4G4 463 aaKnown RBP11.68□□□□□ -0.54
NR1H3-230ENST00000527949 TTC30AQ86WT1 665 aa11.68□□□□□ -0.54
NR1H3-230ENST00000527949 GATA6Q92908 595 aa11.68□□□□□ -0.54
NR1H3-230ENST00000527949 FAM81BQ96LP2 452 aa11.68□□□□□ -0.54
NR1H3-230ENST00000527949 SCNM1Q9BWG6 230 aa11.68□□□□□ -0.54
NR1H3-230ENST00000527949 TMEM121BQ9BXQ6 578 aaPredicted RBP11.68□□□□□ -0.54
NR1H3-230ENST00000527949 NUSAP1Q9BXS6 441 aaKnown RBP11.68□□□□□ -0.54
NR1H3-230ENST00000527949 OLA1Q9NTK5 396 aaKnown RBP11.68□□□□□ -0.54
NR1H3-230ENST00000527949 DEC1Q9P2X7 70 aa11.68□□□□□ -0.54
NR1H3-230ENST00000527949 HESX1Q9UBX0 185 aa11.68□□□□□ -0.54
NR1H3-230ENST00000527949 STARD13Q9Y3M8 1113 aa11.68□□□□□ -0.54
NR1H3-230ENST00000527949 PLXND1Q9Y4D7 1925 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 UPK3BL1B0FP48 263 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 UPK3BL2E5RIL1 263 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 GIPC1O14908 333 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 TULP3O75386 442 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 STC2O76061 302 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 TBX18O95935 607 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 ZBED1O96006 694 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 HOXD12P35452 270 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 HNRNPDQ14103 355 aaKnown RBP11.67□□□□□ -0.54
NR1H3-230ENST00000527949 CRY1Q16526 586 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 EOGTQ5NDL2 527 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 C10orf120Q5SQS8 335 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 KLHL10Q6JEL2 608 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 TERB1Q8NA31 727 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 EHBP1Q8NDI1 1231 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 TTC16Q8NEE8 873 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 SPACA7Q96KW9 195 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 CNOT6LQ96LI5 555 aaKnown RBP11.67□□□□□ -0.54
NR1H3-230ENST00000527949 IRX2Q9BZI1 471 aaPredicted RBP11.67□□□□□ -0.54
NR1H3-230ENST00000527949 CNGB3Q9NQW8 809 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 ARHGEF4Q9NR80 690 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 RWDD2AQ9UIY3 292 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 NAGPAQ9UK23 515 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 FBXO10Q9UK96 956 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 TSPAN16Q9UKR8 245 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 STRIP2Q9ULQ0 834 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 LHX6Q9UPM6 363 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 MSRB2Q9Y3D2 182 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 BAHCC1Q9P281 2608 aa11.67□□□□□ -0.54
NR1H3-230ENST00000527949 CNOT1A5YKK6 2376 aaKnown RBP11.67□□□□□ -0.54
NR1H3-230ENST00000527949 GTPBP10A4D1E9 387 aaKnown RBP11.66□□□□□ -0.54
NR1H3-230ENST00000527949 CDX4O14627 284 aaPredicted RBP11.66□□□□□ -0.54
NR1H3-230ENST00000527949 LATS1O95835 1130 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 AFPP02771 609 aaKnown RBP11.66□□□□□ -0.54
NR1H3-230ENST00000527949 CHKAP35790 457 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 SLC6A11P48066 632 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 RPL34P49207 117 aaKnown RBP11.66□□□□□ -0.54
NR1H3-230ENST00000527949 TKTL1P51854 596 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 ZNF132P52740 706 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 ZNF445P59923 1031 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 PDE4CQ08493 712 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 KCNH2Q12809 1159 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 E2F5Q15329 346 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 GOLGA7BQ2TAP0 167 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 ISM2Q6H9L7 571 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 LPCAT2Q7L5N7 544 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 ENOSF1Q7L5Y1 443 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 BHLHA9Q7RTU4 235 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 C12orf40Q86WS4 652 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 TMEM25Q86YD3 366 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 FAM217AQ8IXS0 508 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 CPXM2Q8N436 756 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 IL17RCQ8NAC3 791 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 MLKLQ8NB16 471 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 SLC35F5Q8WV83 523 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 IRGQQ8WZA9 623 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 WBP2Q969T9 261 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 PLD4Q96BZ4 506 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 HSFY1Q96LI6 401 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 XPO6Q96QU8 1125 aaKnown RBP11.66□□□□□ -0.54
NR1H3-230ENST00000527949 SRRTQ9BXP5 876 aaKnown RBP11.66□□□□□ -0.54
NR1H3-230ENST00000527949 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.66□□□□□ -0.54
NR1H3-230ENST00000527949 CTNND2Q9UQB3 1225 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 SLC27A6Q9Y2P4 619 aa11.66□□□□□ -0.54
NR1H3-230ENST00000527949 HBS1LQ9Y450 684 aaKnown RBP11.66□□□□□ -0.54
NR1H3-230ENST00000527949 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.66□□□□□ -0.54
NR1H3-230ENST00000527949 GFRA2O00451 464 aa11.65□□□□□ -0.54
NR1H3-230ENST00000527949 DCLK1O15075 740 aa11.65□□□□□ -0.54
NR1H3-230ENST00000527949 NPC1O15118 1278 aa11.65□□□□□ -0.54
NR1H3-230ENST00000527949 PENKP01210 267 aaPredicted RBP11.65□□□□□ -0.54
NR1H3-230ENST00000527949 CD19P15391 556 aa11.65□□□□□ -0.54
NR1H3-230ENST00000527949 HOXC13P31276 330 aa11.65□□□□□ -0.54
NR1H3-230ENST00000527949 YWHAGP61981 247 aaKnown RBP eCLIP11.65□□□□□ -0.54
NR1H3-230ENST00000527949 MESP2Q0VG99 397 aa11.65□□□□□ -0.54
NR1H3-230ENST00000527949 TRIP4Q15650 581 aaPredicted RBP11.65□□□□□ -0.54
NR1H3-230ENST00000527949 CT47A1Q5JQC4 288 aaPredicted RBP11.65□□□□□ -0.54
NR1H3-230ENST00000527949 GRAMD4Q6IC98 578 aa11.65□□□□□ -0.54
NR1H3-230ENST00000527949 MSANTD2Q6P1R3 559 aa11.65□□□□□ -0.54
NR1H3-230ENST00000527949 TMEM270Q6UE05 265 aa11.65□□□□□ -0.54
NR1H3-230ENST00000527949 RABEPKQ7Z6M1 372 aa11.65□□□□□ -0.54
NR1H3-230ENST00000527949 SYT12Q8IV01 421 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms