RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 DGKEP52429 567 aa34.56■■■■□ 3.12
SSSCA1-205ENST00000527920 CRY1Q16526 586 aa34.56■■■■□ 3.12
SSSCA1-205ENST00000527920 MSANTD2Q6P1R3 559 aa34.56■■■■□ 3.12
SSSCA1-205ENST00000527920 CPXM2Q8N436 756 aa34.56■■■■□ 3.12
SSSCA1-205ENST00000527920 TSTD1Q8NFU3 115 aa34.56■■■■□ 3.12
SSSCA1-205ENST00000527920 NDST4Q9H3R1 872 aa34.56■■■■□ 3.12
SSSCA1-205ENST00000527920 DNAJC17Q9NVM6 304 aaKnown RBP34.56■■■■□ 3.12
SSSCA1-205ENST00000527920 AGO1Q9UL18 857 aaKnown RBP34.56■■■■□ 3.12
SSSCA1-205ENST00000527920 STARD13Q9Y3M8 1113 aa34.56■■■■□ 3.12
SSSCA1-205ENST00000527920 RPP40O75818 363 aaKnown RBP34.55■■■■□ 3.12
SSSCA1-205ENST00000527920 PENKP01210 267 aaPredicted RBP34.55■■■■□ 3.12
SSSCA1-205ENST00000527920 RETP07949 1114 aa34.55■■■■□ 3.12
SSSCA1-205ENST00000527920 GJB7Q6PEY0 223 aa34.55■■■■□ 3.12
SSSCA1-205ENST00000527920 CEP68Q76N32 757 aa34.55■■■■□ 3.12
SSSCA1-205ENST00000527920 FMNL3Q8IVF7 1028 aa34.55■■■■□ 3.12
SSSCA1-205ENST00000527920 FAM217AQ8IXS0 508 aa34.55■■■■□ 3.12
SSSCA1-205ENST00000527920 TUBGCP2Q9BSJ2 902 aa34.55■■■■□ 3.12
SSSCA1-205ENST00000527920 FBXO10Q9UK96 956 aa34.55■■■■□ 3.12
SSSCA1-205ENST00000527920 BECN2A8MW95 431 aa34.54■■■■□ 3.12
SSSCA1-205ENST00000527920 SART1O43290 800 aaKnown RBP34.54■■■■□ 3.12
SSSCA1-205ENST00000527920 LRP3O75074 770 aa34.54■■■■□ 3.12
SSSCA1-205ENST00000527920 HMBSP08397 361 aa34.54■■■■□ 3.12
SSSCA1-205ENST00000527920 GNA15P30679 374 aa34.54■■■■□ 3.12
SSSCA1-205ENST00000527920 ACADSBP45954 432 aa34.54■■■■□ 3.12
SSSCA1-205ENST00000527920 VWA3BQ502W6 1294 aa34.54■■■■□ 3.12
SSSCA1-205ENST00000527920 MIIPQ5JXC2 388 aa34.54■■■■□ 3.12
SSSCA1-205ENST00000527920 EOGTQ5NDL2 527 aa34.54■■■■□ 3.12
SSSCA1-205ENST00000527920 TRMT11Q7Z4G4 463 aaKnown RBP34.54■■■■□ 3.12
SSSCA1-205ENST00000527920 RASSF3Q86WH2 238 aa34.54■■■■□ 3.12
SSSCA1-205ENST00000527920 ALLCQ8N6M5 410 aa34.54■■■■□ 3.12
SSSCA1-205ENST00000527920 ZNF606Q8WXB4 792 aa34.54■■■■□ 3.12
SSSCA1-205ENST00000527920 EDEM1Q92611 657 aa34.54■■■■□ 3.12
SSSCA1-205ENST00000527920 SIX2Q9NPC8 291 aa34.54■■■■□ 3.12
SSSCA1-205ENST00000527920 SPTBN4Q9H254 2564 aa34.53■■■■□ 3.12
SSSCA1-205ENST00000527920 ANTXRLA6NF34 631 aa34.53■■■■□ 3.12
SSSCA1-205ENST00000527920 LETM1O95202 739 aaPredicted RBP34.53■■■■□ 3.12
SSSCA1-205ENST00000527920 KLF8O95600 359 aaPredicted RBP34.53■■■■□ 3.12
SSSCA1-205ENST00000527920 LATS1O95835 1130 aa34.53■■■■□ 3.12
SSSCA1-205ENST00000527920 TIE1P35590 1138 aa34.53■■■■□ 3.12
SSSCA1-205ENST00000527920 C10orf76Q5T2E6 689 aa34.53■■■■□ 3.12
SSSCA1-205ENST00000527920 DENND1CQ8IV53 801 aa34.53■■■■□ 3.12
SSSCA1-205ENST00000527920 CCDC33Q8N5R6 958 aa34.53■■■■□ 3.12
SSSCA1-205ENST00000527920 GOLGA1Q92805 767 aa34.53■■■■□ 3.12
SSSCA1-205ENST00000527920 LTFP02788 710 aa34.52■■■■□ 3.12
SSSCA1-205ENST00000527920 EEF1GP26641 437 aaKnown RBP34.52■■■■□ 3.12
SSSCA1-205ENST00000527920 HARS2P49590 506 aaKnown RBP34.52■■■■□ 3.12
SSSCA1-205ENST00000527920 APBA1Q02410 837 aa34.52■■■■□ 3.12
SSSCA1-205ENST00000527920 LPAL2Q16609 132 aa34.52■■■■□ 3.12
SSSCA1-205ENST00000527920 ARHGAP44Q17R89 818 aa34.52■■■■□ 3.12
SSSCA1-205ENST00000527920 EMC10Q5UCC4 262 aa34.52■■■■□ 3.12
SSSCA1-205ENST00000527920 DENND1BQ6P3S1 775 aa34.52■■■■□ 3.12
SSSCA1-205ENST00000527920 CACNA2D4Q7Z3S7 1137 aa34.52■■■■□ 3.12
SSSCA1-205ENST00000527920 ARHGAP30Q7Z6I6 1101 aaPredicted RBP34.52■■■■□ 3.12
SSSCA1-205ENST00000527920 KIAA2013Q8IYS2 634 aa34.52■■■■□ 3.12
SSSCA1-205ENST00000527920 TXNDC5Q8NBS9 432 aaKnown RBP34.52■■■■□ 3.12
SSSCA1-205ENST00000527920 ENOX1Q8TC92 643 aaKnown RBP34.52■■■■□ 3.12
SSSCA1-205ENST00000527920 SLC4A5Q9BY07 1137 aa34.52■■■■□ 3.12
SSSCA1-205ENST00000527920 STOML2Q9UJZ1 356 aa34.52■■■■□ 3.12
SSSCA1-205ENST00000527920 KCNJ18B7U540 433 aa34.51■■■■□ 3.12
SSSCA1-205ENST00000527920 THAP12O43422 761 aa34.51■■■■□ 3.12
SSSCA1-205ENST00000527920 DGKGP49619 791 aa34.51■■■■□ 3.12
SSSCA1-205ENST00000527920 KCNJ12Q14500 433 aa34.51■■■■□ 3.12
SSSCA1-205ENST00000527920 FYB2Q5VWT5 728 aa34.51■■■■□ 3.12
SSSCA1-205ENST00000527920 LOXL4Q96JB6 756 aa34.51■■■■□ 3.12
SSSCA1-205ENST00000527920 SLC27A6Q9Y2P4 619 aa34.51■■■■□ 3.12
SSSCA1-205ENST00000527920 SGK1O00141 431 aa34.5■■■■□ 3.11
SSSCA1-205ENST00000527920 TRIM24O15164 1050 aa34.5■■■■□ 3.11
SSSCA1-205ENST00000527920 CISD3P0C7P0 127 aa34.5■■■■□ 3.11
SSSCA1-205ENST00000527920 TGM1P22735 817 aa34.5■■■■□ 3.11
SSSCA1-205ENST00000527920 ZNF445P59923 1031 aa34.5■■■■□ 3.11
SSSCA1-205ENST00000527920 BEND5Q7L4P6 421 aa34.5■■■■□ 3.11
SSSCA1-205ENST00000527920 FAM160A2Q8N612 972 aaPredicted RBP34.5■■■■□ 3.11
SSSCA1-205ENST00000527920 ZNF513Q8N8E2 541 aaPredicted RBP34.5■■■■□ 3.11
SSSCA1-205ENST00000527920 TRIM62Q9BVG3 475 aa34.5■■■■□ 3.11
SSSCA1-205ENST00000527920 SFMBT1Q9UHJ3 866 aa34.5■■■■□ 3.11
SSSCA1-205ENST00000527920 PIK3R2O00459 728 aa34.49■■■■□ 3.11
SSSCA1-205ENST00000527920 ADAM23O75077 832 aa34.49■■■■□ 3.11
SSSCA1-205ENST00000527920 ALDH1A2O94788 518 aa34.49■■■■□ 3.11
SSSCA1-205ENST00000527920 CYBBP04839 570 aa34.49■■■■□ 3.11
SSSCA1-205ENST00000527920 TCP11X2Q5H9J9 407 aa34.49■■■■□ 3.11
SSSCA1-205ENST00000527920 TMEM92Q6UXU6 159 aa34.49■■■■□ 3.11
SSSCA1-205ENST00000527920 TMEM110Q86TL2 294 aa34.49■■■■□ 3.11
SSSCA1-205ENST00000527920 CLEC4CQ8WTT0 213 aa34.49■■■■□ 3.11
SSSCA1-205ENST00000527920 P2RY11Q96G91 374 aa34.49■■■■□ 3.11
SSSCA1-205ENST00000527920 ZC3H10Q96K80 434 aaKnown RBP34.49■■■■□ 3.11
SSSCA1-205ENST00000527920 ST7Q9NRC1 585 aa34.49■■■■□ 3.11
SSSCA1-205ENST00000527920 SAMSN1Q9NSI8 373 aaKnown RBP34.49■■■■□ 3.11
SSSCA1-205ENST00000527920 DNAJC12Q9UKB3 198 aa34.49■■■■□ 3.11
SSSCA1-205ENST00000527920 NFE2L3Q9Y4A8 694 aa34.49■■■■□ 3.11
SSSCA1-205ENST00000527920 IGLV3-27P01718 113 aa34.48■■■■□ 3.11
SSSCA1-205ENST00000527920 USP8P40818 1118 aa34.48■■■■□ 3.11
SSSCA1-205ENST00000527920 RING1Q06587 406 aa34.48■■■■□ 3.11
SSSCA1-205ENST00000527920 MIS12Q9H081 205 aa34.48■■■■□ 3.11
SSSCA1-205ENST00000527920 POLMQ9NP87 494 aaPredicted RBP34.48■■■■□ 3.11
SSSCA1-205ENST00000527920 ACP6Q9NPH0 428 aa34.48■■■■□ 3.11
SSSCA1-205ENST00000527920 PLK2Q9NYY3 685 aa34.48■■■■□ 3.11
SSSCA1-205ENST00000527920 PCDHGC3Q9UN70 934 aa34.48■■■■□ 3.11
SSSCA1-205ENST00000527920 MBD3O95983 291 aa34.47■■■■□ 3.11
SSSCA1-205ENST00000527920 HNRNPLP14866 589 aaKnown RBP eCLIP34.47■■■■□ 3.11
SSSCA1-205ENST00000527920 HSP90AA4PQ58FG1 418 aa34.47■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms