RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 SNX25Q9H3E2 840 aa6.36□□□□□ -1.39
FAM49B-228ENST00000523993 FAM124BQ9H5Z6 455 aaPredicted RBP6.36□□□□□ -1.39
FAM49B-228ENST00000523993 CSNK1G1Q9HCP0 422 aa6.36□□□□□ -1.39
FAM49B-228ENST00000523993 PARD6AQ9NPB6 346 aa6.36□□□□□ -1.39
FAM49B-228ENST00000523993 DUS2Q9NX74 493 aaKnown RBP6.36□□□□□ -1.39
FAM49B-228ENST00000523993 TRPM5Q9NZQ8 1165 aa6.36□□□□□ -1.39
FAM49B-228ENST00000523993 GMEB2Q9UKD1 530 aa6.36□□□□□ -1.39
FAM49B-228ENST00000523993 GPC6Q9Y625 555 aaPredicted RBP6.36□□□□□ -1.39
FAM49B-228ENST00000523993 CKAP5Q14008 2032 aa6.36□□□□□ -1.39
FAM49B-228ENST00000523993 ASCC3Q8N3C0 2202 aaKnown RBP6.35□□□□□ -1.39
FAM49B-228ENST00000523993 KMT2BQ9UMN6 2715 aaPredicted RBP6.35□□□□□ -1.39
FAM49B-228ENST00000523993 ASPMQ8IZT6 3477 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 A0A1B0GVL5 298 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 E2F8A0AVK6 867 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 A8MXQ7 604 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 LEFTY2O00292 366 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 SLC9A3R1O14745 358 aaPredicted RBP6.35□□□□□ -1.39
FAM49B-228ENST00000523993 CLSTN1O94985 981 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 KIF20AO95235 890 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 NFATC1O95644 943 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 EGFP01133 1207 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 NR3C1P04150 777 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 HSP90AA1P07900 732 aaKnown RBP6.35□□□□□ -1.39
FAM49B-228ENST00000523993 GRNP28799 593 aaKnown RBP6.35□□□□□ -1.39
FAM49B-228ENST00000523993 ETFBP38117 255 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 OPRD1P41143 372 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 CASP4P49662 377 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 ATXN1P54253 815 aaKnown RBP6.35□□□□□ -1.39
FAM49B-228ENST00000523993 KRT85P78386 507 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 CYP27A1Q02318 531 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 INCA1Q0VD86 236 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 TAF10Q12962 218 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 TRPC3Q13507 836 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 RSPO4Q2I0M5 234 aaPredicted RBP6.35□□□□□ -1.39
FAM49B-228ENST00000523993 ZNF699Q32M78 642 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 HSF5Q4G112 596 aaPredicted RBP6.35□□□□□ -1.39
FAM49B-228ENST00000523993 ZCWPW2Q504Y3 356 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 COBLL1Q53SF7 1204 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 ZNF667Q5HYK9 610 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 PKN3Q6P5Z2 889 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 SV2AQ7L0J3 742 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 DGLUCYQ7Z3D6 616 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 DDX42Q86XP3 938 aaKnown RBP eCLIP6.35□□□□□ -1.39
FAM49B-228ENST00000523993 GRAMD1CQ8IYS0 662 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 FUKQ8N0W3 1084 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 GUF1Q8N442 669 aaKnown RBP6.35□□□□□ -1.39
FAM49B-228ENST00000523993 OR6B3Q8NGW1 331 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 TTC8Q8TAM2 541 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 SH3RF2Q8TEC5 729 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 NOC3LQ8WTT2 800 aaKnown RBP6.35□□□□□ -1.39
FAM49B-228ENST00000523993 HNRNPLLQ8WVV9 542 aaKnown RBP6.35□□□□□ -1.39
FAM49B-228ENST00000523993 GAB3Q8WWW8 586 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 CD101Q93033 1021 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 OTUB2Q96DC9 234 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 SMARCD1Q96GM5 515 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 SLITRK1Q96PX8 696 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 SRPK1Q96SB4 655 aaKnown RBP6.35□□□□□ -1.39
FAM49B-228ENST00000523993 RTKNQ9BST9 563 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 KLF16Q9BXK1 252 aaPredicted RBP6.35□□□□□ -1.39
FAM49B-228ENST00000523993 TRIM55Q9BYV6 548 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 ZNF518BQ9C0D4 1074 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 SDCBP2Q9H190 292 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 DPEP3Q9H4B8 488 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 PNPLA8Q9NP80 782 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 EXOC1Q9NV70 894 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 RAB23Q9ULC3 237 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 PCDHGA5Q9Y5G8 931 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 ATP6V1DQ9Y5K8 247 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 EPG5Q9HCE0 2579 aa6.35□□□□□ -1.39
FAM49B-228ENST00000523993 CHD8Q9HCK8 2581 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 SPEGQ15772 3267 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 ATP8B3O60423 1300 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 K7EQS6 105 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 CLDN5O00501 218 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 SLC30A4O14863 429 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 EPN2O95208 641 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 ZNF806P0C7X5 589 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 P4HA1P13674 534 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 YWHAQP27348 245 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 GTF2H1P32780 548 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 GPC1P35052 558 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 EIF4A3P38919 411 aaKnown RBP6.34□□□□□ -1.39
FAM49B-228ENST00000523993 SYKP43405 635 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 ASPAP45381 313 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 IFNAR2P48551 515 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 NDUFA8P51970 172 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 CDH8P55286 799 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 WDR4P57081 412 aaKnown RBP6.34□□□□□ -1.39
FAM49B-228ENST00000523993 DLG4P78352 724 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 MRPS21P82921 87 aaKnown RBP6.34□□□□□ -1.39
FAM49B-228ENST00000523993 PWP1Q13610 501 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 EDRF1Q3B7T1 1238 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 RNF187Q5TA31 235 aaPredicted RBP6.34□□□□□ -1.39
FAM49B-228ENST00000523993 KLHDC10Q6PID8 442 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 KRBA2Q6ZNG9 492 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 PRR23CQ6ZRP0 262 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 INTS8Q75QN2 995 aaKnown RBP6.34□□□□□ -1.39
FAM49B-228ENST00000523993 CACNA2D4Q7Z3S7 1137 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 FAM35AQ86V20 835 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 RASSF3Q86WH2 238 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms