RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 TGS1Q96RS0 853 aaKnown RBP15.08■□□□□ 0.01
CLN8-204ENST00000519254 PBX4Q9BYU1 374 aa15.08■□□□□ 0.01
CLN8-204ENST00000519254 NKX2-4Q9H2Z4 354 aa15.08■□□□□ 0.01
CLN8-204ENST00000519254 NGRNQ9NPE2 291 aaKnown RBP15.08■□□□□ 0.01
CLN8-204ENST00000519254 CEP290O15078 2479 aa15.08■□□□□ 0.01
CLN8-204ENST00000519254 ZNF638Q14966 1978 aaKnown RBP15.08■□□□□ 0
CLN8-204ENST00000519254 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.08■□□□□ 0
CLN8-204ENST00000519254 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.08■□□□□ 0
CLN8-204ENST00000519254 PRPSAP2O60256 369 aa15.08■□□□□ 0
CLN8-204ENST00000519254 HSF2BPO75031 334 aa15.08■□□□□ 0
CLN8-204ENST00000519254 PPFIA2O75334 1257 aa15.08■□□□□ 0
CLN8-204ENST00000519254 GAS8O95995 478 aa15.08■□□□□ 0
CLN8-204ENST00000519254 USP17L7P0C7H9 530 aa15.08■□□□□ 0
CLN8-204ENST00000519254 HSD17B3P37058 310 aa15.08■□□□□ 0
CLN8-204ENST00000519254 MAGEA11P43364 429 aa15.08■□□□□ 0
CLN8-204ENST00000519254 SLC5A3P53794 718 aa15.08■□□□□ 0
CLN8-204ENST00000519254 HDAC4P56524 1084 aa15.08■□□□□ 0
CLN8-204ENST00000519254 DHX9Q08211 1270 aaKnown RBP15.08■□□□□ 0
CLN8-204ENST00000519254 RAB41Q5JT25 222 aa15.08■□□□□ 0
CLN8-204ENST00000519254 CFAP58Q5T655 872 aa15.08■□□□□ 0
CLN8-204ENST00000519254 BBS12Q6ZW61 710 aa15.08■□□□□ 0
CLN8-204ENST00000519254 SCAMP5Q8TAC9 235 aa15.08■□□□□ 0
CLN8-204ENST00000519254 SPPL3Q8TCT6 385 aa15.08■□□□□ 0
CLN8-204ENST00000519254 MICAL1Q8TDZ2 1067 aa15.08■□□□□ 0
CLN8-204ENST00000519254 C2orf15Q8WU43 125 aaKnown RBP15.08■□□□□ 0
CLN8-204ENST00000519254 FAM149B1Q96BN6 582 aa15.08■□□□□ 0
CLN8-204ENST00000519254 CCDC114Q96M63 670 aa15.08■□□□□ 0
CLN8-204ENST00000519254 SH3GL2Q99962 352 aa15.08■□□□□ 0
CLN8-204ENST00000519254 DDX23Q9BUQ8 820 aaKnown RBP15.08■□□□□ 0
CLN8-204ENST00000519254 TLR9Q9NR96 1032 aa15.08■□□□□ 0
CLN8-204ENST00000519254 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.08■□□□□ 0
CLN8-204ENST00000519254 WHRNQ9P202 907 aa15.08■□□□□ 0
CLN8-204ENST00000519254 MSRAQ9UJ68 235 aa15.08■□□□□ 0
CLN8-204ENST00000519254 SSX2IPQ9Y2D8 614 aa15.08■□□□□ 0
CLN8-204ENST00000519254 LAMA2P24043 3122 aaKnown RBP15.07■□□□□ 0
CLN8-204ENST00000519254 C5orf67F2Z3F1 127 aa15.07■□□□□ 0
CLN8-204ENST00000519254 GRM6O15303 877 aa15.07■□□□□ 0
CLN8-204ENST00000519254 CST8O60676 142 aa15.07■□□□□ 0
CLN8-204ENST00000519254 HAPLN1P10915 354 aaPredicted RBP15.07■□□□□ 0
CLN8-204ENST00000519254 MRPS5P82675 430 aaKnown RBP15.07■□□□□ 0
CLN8-204ENST00000519254 CREMQ03060 361 aa15.07■□□□□ 0
CLN8-204ENST00000519254 BYSLQ13895 437 aaKnown RBP15.07■□□□□ 0
CLN8-204ENST00000519254 TRIP13Q15645 432 aaPredicted RBP15.07■□□□□ 0
CLN8-204ENST00000519254 HSP90B2PQ58FF3 399 aa15.07■□□□□ 0
CLN8-204ENST00000519254 EFHC1Q5JVL4 640 aa15.07■□□□□ 0
CLN8-204ENST00000519254 ZNF461Q8TAF7 563 aa15.07■□□□□ 0
CLN8-204ENST00000519254 HAUS1Q96CS2 278 aa15.07■□□□□ 0
CLN8-204ENST00000519254 C8orf48Q96LL4 319 aa15.07■□□□□ 0
CLN8-204ENST00000519254 CYP4F11Q9HBI6 524 aa15.07■□□□□ 0
CLN8-204ENST00000519254 PNPLA8Q9NP80 782 aa15.07■□□□□ 0
CLN8-204ENST00000519254 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.07■□□□□ 0
CLN8-204ENST00000519254 AFF4Q9UHB7 1163 aaKnown RBP15.07■□□□□ 0
CLN8-204ENST00000519254 LZTS1Q9Y250 596 aa15.07■□□□□ 0
CLN8-204ENST00000519254 DRG1Q9Y295 367 aaKnown RBP15.07■□□□□ 0
CLN8-204ENST00000519254 PATJQ8NI35 1801 aa15.07■□□□□ 0
CLN8-204ENST00000519254 LILRB3O75022 631 aa15.06■□□□□ 0
CLN8-204ENST00000519254 FBXO21O94952 628 aa15.06■□□□□ 0
CLN8-204ENST00000519254 SEC24AO95486 1093 aa15.06■□□□□ 0
CLN8-204ENST00000519254 ZBED1O96006 694 aa15.06■□□□□ 0
CLN8-204ENST00000519254 CNPP09543 421 aaKnown RBP15.06■□□□□ 0
CLN8-204ENST00000519254 SPATA31D3P0C874 917 aa15.06■□□□□ 0
CLN8-204ENST00000519254 KLRC2P26717 231 aa15.06■□□□□ 0
CLN8-204ENST00000519254 VCPP55072 806 aaKnown RBP15.06■□□□□ 0
CLN8-204ENST00000519254 CDH6P55285 790 aa15.06■□□□□ 0
CLN8-204ENST00000519254 DYNLT1P63172 113 aa15.06■□□□□ 0
CLN8-204ENST00000519254 MMRN1Q13201 1228 aa15.06■□□□□ 0
CLN8-204ENST00000519254 RAB33AQ14088 237 aa15.06■□□□□ 0
CLN8-204ENST00000519254 DPYSL3Q14195 570 aa15.06■□□□□ 0
CLN8-204ENST00000519254 OASLQ15646 514 aaKnown RBP15.06■□□□□ 0
CLN8-204ENST00000519254 BOLA3Q53S33 107 aa15.06■□□□□ 0
CLN8-204ENST00000519254 PPP2R2DQ66LE6 453 aa15.06■□□□□ 0
CLN8-204ENST00000519254 SCYL2Q6P3W7 929 aa15.06■□□□□ 0
CLN8-204ENST00000519254 SPATA31D4Q6ZUB0 917 aa15.06■□□□□ 0
CLN8-204ENST00000519254 SLC35B2Q8TB61 432 aa15.06■□□□□ 0
CLN8-204ENST00000519254 GIPC2Q8TF65 315 aa15.06■□□□□ 0
CLN8-204ENST00000519254 TEKT4Q8WW24 435 aa15.06■□□□□ 0
CLN8-204ENST00000519254 NKD2Q969F2 451 aaPredicted RBP15.06■□□□□ 0
CLN8-204ENST00000519254 FAM129AQ9BZQ8 928 aa15.06■□□□□ 0
CLN8-204ENST00000519254 CNGB3Q9NQW8 809 aa15.06■□□□□ 0
CLN8-204ENST00000519254 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.06■□□□□ 0
CLN8-204ENST00000519254 FNIP2Q9P278 1114 aa15.06■□□□□ 0
CLN8-204ENST00000519254 SAE1Q9UBE0 346 aaPredicted RBP15.06■□□□□ 0
CLN8-204ENST00000519254 ASIC3Q9UHC3 531 aa15.06■□□□□ 0
CLN8-204ENST00000519254 HIDE1A8MVS5 230 aa15.06■□□□□ 0
CLN8-204ENST00000519254 PRRG1O14668 218 aa15.06■□□□□ 0
CLN8-204ENST00000519254 ABLIM3O94929 683 aa15.06■□□□□ 0
CLN8-204ENST00000519254 RB1P06400 928 aa15.06■□□□□ 0
CLN8-204ENST00000519254 ITIH2P19823 946 aa15.06■□□□□ 0
CLN8-204ENST00000519254 MATKP42679 507 aa15.06■□□□□ 0
CLN8-204ENST00000519254 DAOAP59103 153 aa15.06■□□□□ 0
CLN8-204ENST00000519254 LMNB2Q03252 620 aa15.06■□□□□ 0
CLN8-204ENST00000519254 GPM6BQ13491 265 aa15.06■□□□□ 0
CLN8-204ENST00000519254 RAB30Q15771 203 aa15.06■□□□□ 0
CLN8-204ENST00000519254 ZC3H12AQ5D1E8 599 aaKnown RBP15.06■□□□□ 0
CLN8-204ENST00000519254 TPGS2Q68CL5 300 aa15.06■□□□□ 0
CLN8-204ENST00000519254 RHBDF2Q6PJF5 856 aa15.06■□□□□ 0
CLN8-204ENST00000519254 HFE2Q6ZVN8 426 aa15.06■□□□□ 0
CLN8-204ENST00000519254 PRUNE1Q86TP1 453 aa15.06■□□□□ 0
CLN8-204ENST00000519254 TDHQ8IZJ6 230 aa15.06■□□□□ 0
CLN8-204ENST00000519254 ALLCQ8N6M5 410 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms