RNA–Protein interactions for RNA: ENST00000513636.1

ATP2C1-220, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-220ENST00000513636 SUMO2P61956 95 aaKnown RBP4.3□□□□□ -1.72
ATP2C1-220ENST00000513636 E2F1Q01094 437 aa4.3□□□□□ -1.72
ATP2C1-220ENST00000513636 KRT17Q04695 432 aa4.3□□□□□ -1.72
ATP2C1-220ENST00000513636 NOGQ13253 232 aa4.3□□□□□ -1.72
ATP2C1-220ENST00000513636 CCDC184Q52MB2 194 aa4.3□□□□□ -1.72
ATP2C1-220ENST00000513636 TMEM63BQ5T3F8 832 aa4.3□□□□□ -1.72
ATP2C1-220ENST00000513636 ZNF549Q6P9A3 640 aa4.3□□□□□ -1.72
ATP2C1-220ENST00000513636 TMEM65Q6PI78 240 aa4.3□□□□□ -1.72
ATP2C1-220ENST00000513636 CAND1Q86VP6 1230 aaKnown RBP4.3□□□□□ -1.72
ATP2C1-220ENST00000513636 ARFGAP1Q8N6T3 406 aa4.3□□□□□ -1.72
ATP2C1-220ENST00000513636 BRIX1Q8TDN6 353 aaKnown RBP4.3□□□□□ -1.72
ATP2C1-220ENST00000513636 IP6K1Q92551 441 aa4.3□□□□□ -1.72
ATP2C1-220ENST00000513636 FAM167AQ96KS9 214 aa4.3□□□□□ -1.72
ATP2C1-220ENST00000513636 MMS19Q96T76 1030 aa4.3□□□□□ -1.72
ATP2C1-220ENST00000513636 TRMOQ9BU70 441 aa4.3□□□□□ -1.72
ATP2C1-220ENST00000513636 MAFFQ9ULX9 164 aa4.3□□□□□ -1.72
ATP2C1-220ENST00000513636 GABRQQ9UN88 632 aa4.3□□□□□ -1.72
ATP2C1-220ENST00000513636 PLEKHM1Q9Y4G2 1056 aa4.3□□□□□ -1.72
ATP2C1-220ENST00000513636 KDM3BQ7LBC6 1761 aa4.3□□□□□ -1.72
ATP2C1-220ENST00000513636 CRB1P82279 1406 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 TNS2Q63HR2 1409 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 EP400Q96L91 3159 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 PAPPAQ13219 1627 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 IGSF1Q8N6C5 1336 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 SHTN1A0MZ66 631 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 TLDC2A0PJX2 215 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 EME2A4GXA9 379 aaPredicted RBP4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 LACTBL1A8MY62 500 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 hCG_1984214I3L0E3 225 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 PCDHGA12O60330 932 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 GRPP07492 148 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 EXOSC9Q06265 439 aaKnown RBP4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 EIF4A2Q14240 407 aaKnown RBP4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 WDR43Q15061 677 aaKnown RBP eCLIP4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 INAVAQ3KP66 663 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 HSP90AB2PQ58FF8 381 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 DENND2CQ68D51 928 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 SFTPA1Q8IWL2 248 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 ADHFE1Q8IWW8 467 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 IZUMO1Q8IYV9 350 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 KRT78Q8N1N4 520 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 MAP4K1Q92918 833 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 ZPBPQ9BS86 351 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 PNPOQ9NVS9 261 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 HEY2Q9UBP5 337 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 SERPINB13Q9UIV8 391 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 MRPS17Q9Y2R5 130 aaKnown RBP4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 PCDHGA9Q9Y5G4 932 aaKnown RBP4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 PCDHGA8Q9Y5G5 932 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 PCDHGA7Q9Y5G6 932 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 PCDHGA6Q9Y5G7 932 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 PCDHGA3Q9Y5H0 932 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 LAMB4A4D0S4 1761 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 OVOS2A0A0G2JMS6 1433 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 DISP2A7MBM2 1401 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 ATRNO75882 1429 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 NHSQ6T4R5 1651 aa4.29□□□□□ -1.72
ATP2C1-220ENST00000513636 PLEKHG2Q9H7P9 1386 aa4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 BTAF1O14981 1849 aa4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 UBR2Q8IWV8 1755 aa4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 H3BUI4 141 aa4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 TLR2O60603 784 aa4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 UNC5CO95185 931 aa4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 MT-CO3P00414 261 aa4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 FGAP02671 866 aa4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 HK3P52790 923 aa4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 COPB1P53618 953 aaKnown RBP4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 PRKAG1P54619 331 aa4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 RPS13P62277 151 aaKnown RBP4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 RHDQ02161 417 aa4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 ABCB5Q2M3G0 1257 aa4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 RNASE12Q5GAN4 147 aaKnown RBP4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 UBAP2Q5T6F2 1119 aaKnown RBP4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 SYDE2Q5VT97 1194 aa4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 USP43Q70EL4 1123 aa4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 BCDIN3DQ7Z5W3 292 aaKnown RBP4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 NECAB2Q7Z6G3 386 aa4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 PPP1R3BQ86XI6 285 aa4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 ZNF548Q8NEK5 533 aaPredicted RBP4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 LTV1Q96GA3 475 aaPredicted RBP4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 HS6ST2Q96MM7 605 aa4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 SLCO5A1Q9H2Y9 848 aa4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 SARS2Q9NP81 518 aaKnown RBP4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 NUDCQ9Y266 331 aa4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 BCL9LQ86UU0 1499 aa4.28□□□□□ -1.72
ATP2C1-220ENST00000513636 AFF2P51816 1311 aa4.27□□□□□ -1.73
ATP2C1-220ENST00000513636 C5P01031 1676 aa4.27□□□□□ -1.73
ATP2C1-220ENST00000513636 MRC1P22897 1456 aa4.27□□□□□ -1.73
ATP2C1-220ENST00000513636 ERVV-2B6SEH9 535 aa4.27□□□□□ -1.73
ATP2C1-220ENST00000513636 ERC2O15083 957 aa4.27□□□□□ -1.73
ATP2C1-220ENST00000513636 KRT86O43790 486 aa4.27□□□□□ -1.73
ATP2C1-220ENST00000513636 VIL1P09327 827 aaKnown RBP4.27□□□□□ -1.73
ATP2C1-220ENST00000513636 U2AF1L5P0DN76 240 aaPredicted RBP4.27□□□□□ -1.73
ATP2C1-220ENST00000513636 CYP2C9P11712 490 aa4.27□□□□□ -1.73
ATP2C1-220ENST00000513636 XRCC6P12956 609 aaKnown RBP eCLIP4.27□□□□□ -1.73
ATP2C1-220ENST00000513636 TYRP14679 529 aa4.27□□□□□ -1.73
ATP2C1-220ENST00000513636 MT3P25713 68 aa4.27□□□□□ -1.73
ATP2C1-220ENST00000513636 VIPR2P41587 438 aa4.27□□□□□ -1.73
ATP2C1-220ENST00000513636 U2AF1Q01081 240 aaKnown RBP eCLIP4.27□□□□□ -1.73
ATP2C1-220ENST00000513636 ITKQ08881 620 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms