RNA–Protein interactions for RNA: ENST00000513636.1

ATP2C1-220, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-220ENST00000513636 AEBP2Q6ZN18 517 aaPredicted RBP26.73■■□□□ 1.87
ATP2C1-220ENST00000513636 CHIC1Q5VXU3 224 aa25.31■■□□□ 1.64
ATP2C1-220ENST00000513636 SENP3Q9H4L4 574 aaPredicted RBP22.97■■□□□ 1.27
ATP2C1-220ENST00000513636 PHF23Q9BUL5 403 aaPredicted RBP22.57■■□□□ 1.2
ATP2C1-220ENST00000513636 FOXD1Q16676 465 aa21.44■■□□□ 1.02
ATP2C1-220ENST00000513636 POTEDQ86YR6 584 aa20.84■□□□□ 0.93
ATP2C1-220ENST00000513636 MSH5O43196 834 aa20.35■□□□□ 0.85
ATP2C1-220ENST00000513636 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
ATP2C1-220ENST00000513636 PIAS4Q8N2W9 510 aaPredicted RBP19.99■□□□□ 0.79
ATP2C1-220ENST00000513636 PPP6R1Q9UPN7 881 aa19.78■□□□□ 0.76
ATP2C1-220ENST00000513636 ADRA2BP18089 450 aa19.77■□□□□ 0.76
ATP2C1-220ENST00000513636 SCAF1Q9H7N4 1312 aaKnown RBP18.25■□□□□ 0.51
ATP2C1-220ENST00000513636 MAPK8IP2Q13387 824 aaPredicted RBP18.16■□□□□ 0.5
ATP2C1-220ENST00000513636 DMRT2Q9Y5R5 561 aa18.08■□□□□ 0.48
ATP2C1-220ENST00000513636 CACNB1Q02641 598 aaPredicted RBP17.89■□□□□ 0.45
ATP2C1-220ENST00000513636 PPP4R3CPQ6ZMV5 832 aa17.75■□□□□ 0.43
ATP2C1-220ENST00000513636 DCAF8L1A6NGE4 600 aa17.58■□□□□ 0.4
ATP2C1-220ENST00000513636 CNKSR2Q8WXI2 1034 aa17.45■□□□□ 0.38
ATP2C1-220ENST00000513636 HOXD11P31277 338 aaPredicted RBP17.35■□□□□ 0.37
ATP2C1-220ENST00000513636 RNF216Q9NWF9 866 aaPredicted RBP17.27■□□□□ 0.36
ATP2C1-220ENST00000513636 RNF39Q9H2S5 420 aa17.25■□□□□ 0.35
ATP2C1-220ENST00000513636 NCBP3Q53F19 620 aaKnown RBP17.17■□□□□ 0.34
ATP2C1-220ENST00000513636 C1QBPQ07021 282 aaKnown RBP17■□□□□ 0.31
ATP2C1-220ENST00000513636 DNAJC5BQ9UF47 199 aa16.78■□□□□ 0.28
ATP2C1-220ENST00000513636 NPM3O75607 178 aaKnown RBP16.77■□□□□ 0.28
ATP2C1-220ENST00000513636 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.71■□□□□ 0.27
ATP2C1-220ENST00000513636 KCNA4P22459 653 aa16.41■□□□□ 0.22
ATP2C1-220ENST00000513636 POTEHQ6S545 545 aa16.25■□□□□ 0.19
ATP2C1-220ENST00000513636 U3KPZ7 1027 aaPredicted RBP16.19■□□□□ 0.18
ATP2C1-220ENST00000513636 CAPN15O75808 1086 aa16.09■□□□□ 0.17
ATP2C1-220ENST00000513636 SPINK5Q9NQ38 1064 aaPredicted RBP15.98■□□□□ 0.15
ATP2C1-220ENST00000513636 SLC4A2P04920 1241 aa15.97■□□□□ 0.15
ATP2C1-220ENST00000513636 DSG3P32926 999 aa15.97■□□□□ 0.15
ATP2C1-220ENST00000513636 APLP2Q06481 763 aa15.95■□□□□ 0.14
ATP2C1-220ENST00000513636 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.9■□□□□ 0.14
ATP2C1-220ENST00000513636 HNRNPUL2Q1KMD3 747 aaKnown RBP15.9■□□□□ 0.14
ATP2C1-220ENST00000513636 TRHP20396 242 aaPredicted RBP15.82■□□□□ 0.12
ATP2C1-220ENST00000513636 ZNF219Q9P2Y4 722 aaPredicted RBP15.77■□□□□ 0.12
ATP2C1-220ENST00000513636 SAMD1Q6SPF0 538 aaPredicted RBP15.76■□□□□ 0.11
ATP2C1-220ENST00000513636 ABCB7O75027 752 aa15.66■□□□□ 0.1
ATP2C1-220ENST00000513636 MYCNP04198 464 aaPredicted RBP15.58■□□□□ 0.08
ATP2C1-220ENST00000513636 SLC4A1APQ9BWU0 796 aaKnown RBP15.57■□□□□ 0.08
ATP2C1-220ENST00000513636 FOXD4L1Q9NU39 408 aa15.39■□□□□ 0.05
ATP2C1-220ENST00000513636 POLA2Q14181 598 aa15.34■□□□□ 0.05
ATP2C1-220ENST00000513636 RBM42Q9BTD8 480 aaKnown RBP15.32■□□□□ 0.04
ATP2C1-220ENST00000513636 CHRDL2Q6WN34 429 aa15.21■□□□□ 0.03
ATP2C1-220ENST00000513636 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
ATP2C1-220ENST00000513636 ZBTB12Q9Y330 459 aaPredicted RBP15.09■□□□□ 0.01
ATP2C1-220ENST00000513636 ZBTB22O15209 634 aa15□□□□□ -0.01
ATP2C1-220ENST00000513636 SP7Q8TDD2 431 aaPredicted RBP14.95□□□□□ -0.02
ATP2C1-220ENST00000513636 ATXN8OSP0DMR3 200 aa14.92□□□□□ -0.02
ATP2C1-220ENST00000513636 AKT1S1Q96B36 256 aa14.87□□□□□ -0.03
ATP2C1-220ENST00000513636 OSCARQ8IYS5 282 aa14.81□□□□□ -0.04
ATP2C1-220ENST00000513636 FBLN2P98095 1184 aa14.73□□□□□ -0.05
ATP2C1-220ENST00000513636 REM2Q8IYK8 340 aaPredicted RBP14.7□□□□□ -0.06
ATP2C1-220ENST00000513636 PIP4P2Q8N4L2 257 aa14.69□□□□□ -0.06
ATP2C1-220ENST00000513636 HAX1O00165 279 aa14.68□□□□□ -0.06
ATP2C1-220ENST00000513636 SPDYE2BA6NHP3 402 aa14.57□□□□□ -0.08
ATP2C1-220ENST00000513636 SPDYE6P0CI01 402 aa14.57□□□□□ -0.08
ATP2C1-220ENST00000513636 SPDYE2Q495Y8 402 aa14.57□□□□□ -0.08
ATP2C1-220ENST00000513636 PITPNM1O00562 1244 aa14.53□□□□□ -0.08
ATP2C1-220ENST00000513636 FXR2P51116 673 aaKnown RBP eCLIP14.47□□□□□ -0.09
ATP2C1-220ENST00000513636 ZNF692Q9BU19 519 aaPredicted RBP14.44□□□□□ -0.1
ATP2C1-220ENST00000513636 MKRN4PQ13434 485 aaPredicted RBP14.39□□□□□ -0.11
ATP2C1-220ENST00000513636 CLEC11AQ9Y240 323 aa14.38□□□□□ -0.11
ATP2C1-220ENST00000513636 SPDYE1Q8NFV5 336 aaPredicted RBP14.36□□□□□ -0.11
ATP2C1-220ENST00000513636 CSRNP3Q8WYN3 585 aa14.34□□□□□ -0.11
ATP2C1-220ENST00000513636 EVX2Q03828 476 aa14.32□□□□□ -0.12
ATP2C1-220ENST00000513636 SSUH2Q9Y2M2 353 aa14.28□□□□□ -0.12
ATP2C1-220ENST00000513636 EHMT2Q96KQ7 1210 aa14.25□□□□□ -0.13
ATP2C1-220ENST00000513636 PRKAR2AP13861 404 aaKnown RBP14.21□□□□□ -0.13
ATP2C1-220ENST00000513636 PABPN1Q86U42 306 aaKnown RBP eCLIP14.18□□□□□ -0.14
ATP2C1-220ENST00000513636 PRR29P0C7W0 189 aa14.13□□□□□ -0.15
ATP2C1-220ENST00000513636 C19orf67A6NJJ6 358 aa14.03□□□□□ -0.16
ATP2C1-220ENST00000513636 LHX8Q68G74 356 aa14.03□□□□□ -0.16
ATP2C1-220ENST00000513636 CHADLQ6NUI6 762 aa14.01□□□□□ -0.17
ATP2C1-220ENST00000513636 GABBR2O75899 941 aa14□□□□□ -0.17
ATP2C1-220ENST00000513636 STAG3Q9UJ98 1225 aa13.86□□□□□ -0.19
ATP2C1-220ENST00000513636 SPDYE4A6NLX3 237 aa13.84□□□□□ -0.19
ATP2C1-220ENST00000513636 FARP1Q9Y4F1 1045 aaPredicted RBP13.81□□□□□ -0.2
ATP2C1-220ENST00000513636 CD44P16070 742 aaKnown RBP13.76□□□□□ -0.21
ATP2C1-220ENST00000513636 PLSCR2Q9NRY7 297 aa13.75□□□□□ -0.21
ATP2C1-220ENST00000513636 POTEIP0CG38 1075 aa13.65□□□□□ -0.22
ATP2C1-220ENST00000513636 CLCN6P51797 869 aa13.63□□□□□ -0.23
ATP2C1-220ENST00000513636 CREBZFQ9NS37 354 aa13.63□□□□□ -0.23
ATP2C1-220ENST00000513636 DCBLD2Q96PD2 775 aa13.61□□□□□ -0.23
ATP2C1-220ENST00000513636 ZRANB1Q9UGI0 708 aa13.58□□□□□ -0.24
ATP2C1-220ENST00000513636 PAK3O75914 559 aaPredicted RBP13.57□□□□□ -0.24
ATP2C1-220ENST00000513636 NPM1P06748 294 aaKnown RBP eCLIP13.54□□□□□ -0.24
ATP2C1-220ENST00000513636 ZNF579Q8NAF0 562 aaKnown RBP13.48□□□□□ -0.25
ATP2C1-220ENST00000513636 PLEKHG5O94827 1062 aa13.39□□□□□ -0.27
ATP2C1-220ENST00000513636 PROM2Q8N271 834 aa13.33□□□□□ -0.28
ATP2C1-220ENST00000513636 GALR2O43603 387 aaPredicted RBP13.32□□□□□ -0.28
ATP2C1-220ENST00000513636 MNX1P50219 401 aaPredicted RBP13.32□□□□□ -0.28
ATP2C1-220ENST00000513636 PHF12Q96QT6 1004 aa13.31□□□□□ -0.28
ATP2C1-220ENST00000513636 OTUD5Q96G74 571 aa13.3□□□□□ -0.28
ATP2C1-220ENST00000513636 MIER1Q8N108 512 aa13.29□□□□□ -0.28
ATP2C1-220ENST00000513636 POTEMA6NI47 508 aa13.26□□□□□ -0.29
ATP2C1-220ENST00000513636 TSPYL2Q9H2G4 693 aaPredicted RBP13.25□□□□□ -0.29
ATP2C1-220ENST00000513636 POTEB2H3BUK9 544 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms