RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 PGBD3Q8N328 593 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 KIAA1958Q8N8K9 716 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 SUMF1Q8NBK3 374 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 TXNDC5Q8NBS9 432 aaKnown RBP6.81□□□□□ -1.32
KDM3B-208ENST00000512928 LMO3Q8TAP4 145 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 NELL1Q92832 810 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 FAM149B1Q96BN6 582 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 TPSD1Q9BZJ3 242 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 UBXN6Q9BZV1 441 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 DCLK3Q9C098 648 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 HSD3B7Q9H2F3 369 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 THAP9Q9H5L6 903 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 OLA1Q9NTK5 396 aaKnown RBP6.81□□□□□ -1.32
KDM3B-208ENST00000512928 WDR35Q9P2L0 1181 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 APEX2Q9UBZ4 518 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 SFMBT1Q9UHJ3 866 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.81□□□□□ -1.32
KDM3B-208ENST00000512928 INVSQ9Y283 1065 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 EP300Q09472 2414 aaPredicted RBP6.81□□□□□ -1.32
KDM3B-208ENST00000512928 GPR179Q6PRD1 2367 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 ZNF292O60281 2723 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 TCRBV21S2A2A0A5A6 115 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 FAM170AA1A519 330 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 CAPN9O14815 690 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 TSPAN3O60637 253 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 ALDH1A2O94788 518 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 CYBBP04839 570 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 TPM2P07951 284 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 NCAM1P13591 858 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 ERCC5P28715 1186 aaPredicted RBP6.8□□□□□ -1.32
KDM3B-208ENST00000512928 CNR2P34972 360 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 CHKAP35790 457 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 DGKGP49619 791 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 ZNF132P52740 706 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 DAOAP59103 153 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 MRPS21P82921 87 aaKnown RBP6.8□□□□□ -1.32
KDM3B-208ENST00000512928 SPEM2Q0P670 501 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 RAPGEF1Q13905 1077 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 SKOR2Q2VWA4 1001 aaPredicted RBP6.8□□□□□ -1.32
KDM3B-208ENST00000512928 OTOGLQ3ZCN5 2332 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 VWA3BQ502W6 1294 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 EOGTQ5NDL2 527 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 EMC10Q5UCC4 262 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 PM20D1Q6GTS8 502 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 LAIR1Q6GTX8 287 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 SDE2Q6IQ49 451 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 DENND1BQ6P3S1 775 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 ENOSF1Q7L5Y1 443 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 DGLUCYQ7Z3D6 616 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 IRF2BP1Q8IU81 584 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 SCUBE3Q8IX30 993 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 CHPFQ8IZ52 775 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 CAMKK1Q8N5S9 505 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 ZNF513Q8N8E2 541 aaPredicted RBP6.8□□□□□ -1.32
KDM3B-208ENST00000512928 TERB1Q8NA31 727 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 USP33Q8TEY7 942 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 CLEC4CQ8WTT0 213 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 DDI1Q8WTU0 396 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 HMGB4Q8WW32 186 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 GAB3Q8WWW8 586 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 KCTD13Q8WZ19 329 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 PLD4Q96BZ4 506 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 FAM81BQ96LP2 452 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 PCMTD1Q96MG8 357 aaPredicted RBP6.8□□□□□ -1.32
KDM3B-208ENST00000512928 ZSWIM1Q9BR11 485 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 TUBGCP2Q9BSJ2 902 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 PDCL3Q9H2J4 239 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 NDST4Q9H3R1 872 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 SYNCQ9H7C4 482 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 POLMQ9NP87 494 aaPredicted RBP6.8□□□□□ -1.32
KDM3B-208ENST00000512928 ACP6Q9NPH0 428 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 CNGB3Q9NQW8 809 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 ABCC13Q9NSE7 274 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 SAMSN1Q9NSI8 373 aaKnown RBP6.8□□□□□ -1.32
KDM3B-208ENST00000512928 TAB2Q9NYJ8 693 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 DNAJC12Q9UKB3 198 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 AGO1Q9UL18 857 aaKnown RBP6.8□□□□□ -1.32
KDM3B-208ENST00000512928 ZNF510Q9Y2H8 683 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 F5P12259 2224 aa6.8□□□□□ -1.32
KDM3B-208ENST00000512928 SGK1O00141 431 aa6.79□□□□□ -1.32
KDM3B-208ENST00000512928 DCLK1O15075 740 aa6.79□□□□□ -1.32
KDM3B-208ENST00000512928 ZBTB24O43167 697 aaPredicted RBP6.79□□□□□ -1.32
KDM3B-208ENST00000512928 MAP3K13O43283 966 aa6.79□□□□□ -1.32
KDM3B-208ENST00000512928 CACNG3O60359 315 aa6.79□□□□□ -1.32
KDM3B-208ENST00000512928 GREM1O60565 184 aa6.79□□□□□ -1.32
KDM3B-208ENST00000512928 FBXO21O94952 628 aa6.79□□□□□ -1.32
KDM3B-208ENST00000512928 LTFP02788 710 aa6.79□□□□□ -1.32
KDM3B-208ENST00000512928 KLKB1P03952 638 aa6.79□□□□□ -1.32
KDM3B-208ENST00000512928 PNMA6AP0CW24 399 aaPredicted RBP6.79□□□□□ -1.32
KDM3B-208ENST00000512928 HOXB2P14652 356 aa6.79□□□□□ -1.32
KDM3B-208ENST00000512928 PON1P27169 355 aa6.79□□□□□ -1.32
KDM3B-208ENST00000512928 KRT9P35527 623 aa6.79□□□□□ -1.32
KDM3B-208ENST00000512928 TNFRSF4P43489 277 aa6.79□□□□□ -1.32
KDM3B-208ENST00000512928 ARID5AQ03989 594 aa6.79□□□□□ -1.32
KDM3B-208ENST00000512928 PTK2Q05397 1052 aa6.79□□□□□ -1.32
KDM3B-208ENST00000512928 NCAPHQ15003 741 aa6.79□□□□□ -1.32
KDM3B-208ENST00000512928 ELF2Q15723 593 aa6.79□□□□□ -1.32
KDM3B-208ENST00000512928 CCDC6Q16204 474 aa6.79□□□□□ -1.32
KDM3B-208ENST00000512928 CRY1Q16526 586 aa6.79□□□□□ -1.32
KDM3B-208ENST00000512928 RSPO4Q2I0M5 234 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms