RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 CBX8Q9HC52 389 aa6.13□□□□□ -1.43
RNF4-217ENST00000511892 PNPLA8Q9NP80 782 aa6.13□□□□□ -1.43
RNF4-217ENST00000511892 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.13□□□□□ -1.43
RNF4-217ENST00000511892 DLL3Q9NYJ7 618 aa6.13□□□□□ -1.43
RNF4-217ENST00000511892 TBC1D14Q9P2M4 693 aa6.13□□□□□ -1.43
RNF4-217ENST00000511892 ARMCX3Q9UH62 379 aaPredicted RBP6.13□□□□□ -1.43
RNF4-217ENST00000511892 NUDT5Q9UKK9 219 aa6.13□□□□□ -1.43
RNF4-217ENST00000511892 HCN2Q9UL51 889 aa6.13□□□□□ -1.43
RNF4-217ENST00000511892 SLC8A2Q9UPR5 921 aa6.13□□□□□ -1.43
RNF4-217ENST00000511892 SH3BP1Q9Y3L3 701 aa6.13□□□□□ -1.43
RNF4-217ENST00000511892 NYNRINQ9P2P1 1898 aaKnown RBP6.13□□□□□ -1.43
RNF4-217ENST00000511892 CACNA1EQ15878 2313 aa6.13□□□□□ -1.43
RNF4-217ENST00000511892 BECN2A8MW95 431 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 RNF225M0QZC1 329 aaPredicted RBP6.12□□□□□ -1.43
RNF4-217ENST00000511892 TULP2O00295 520 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 BIN1O00499 593 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 PSMA7O14818 248 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 DCLK1O15075 740 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 TRIM24O15164 1050 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 AXIN1O15169 862 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 HOXC11O43248 304 aaPredicted RBP6.12□□□□□ -1.43
RNF4-217ENST00000511892 ADAM23O75077 832 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 RPP40O75818 363 aaKnown RBP6.12□□□□□ -1.43
RNF4-217ENST00000511892 KAT7O95251 611 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 APBB3O95704 486 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 ADH1CP00326 375 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 CALCAP01258 141 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 APODP05090 189 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 RETP07949 1114 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 TPRP12270 2363 aaKnown RBP6.12□□□□□ -1.43
RNF4-217ENST00000511892 TRIM21P19474 475 aaKnown RBP6.12□□□□□ -1.43
RNF4-217ENST00000511892 CDC25BP30305 580 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 ATP5C1P36542 298 aaKnown RBP6.12□□□□□ -1.43
RNF4-217ENST00000511892 EIF2DP41214 584 aaKnown RBP6.12□□□□□ -1.43
RNF4-217ENST00000511892 KIR2DL1P43626 348 aaPredicted RBP6.12□□□□□ -1.43
RNF4-217ENST00000511892 STX17P56962 302 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 MRPS21P82921 87 aaKnown RBP6.12□□□□□ -1.43
RNF4-217ENST00000511892 GAD2Q05329 585 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 KDSRQ06136 332 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 TP53BP1Q12888 1972 aaPredicted RBP6.12□□□□□ -1.43
RNF4-217ENST00000511892 LRMPQ12912 555 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 STIM1Q13586 685 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 DMC1Q14565 340 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 NUMA1Q14980 2115 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 IQCB1Q15051 598 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 RSPO4Q2I0M5 234 aaPredicted RBP6.12□□□□□ -1.43
RNF4-217ENST00000511892 C10orf120Q5SQS8 335 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 EMC10Q5UCC4 262 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 PM20D1Q6GTS8 502 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 KLHL10Q6JEL2 608 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 KLHDC10Q6PID8 442 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 FOXR2Q6PJQ5 311 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 CEP68Q76N32 757 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 CACNA2D4Q7Z3S7 1137 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 KBTBD6Q86V97 674 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 PIGZQ86VD9 579 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 ZSCAN30Q86W11 494 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 TTC39CQ8N584 583 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 CCDC33Q8N5R6 958 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 ALLCQ8N6M5 410 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 GPR161Q8N6U8 529 aaKnown RBP6.12□□□□□ -1.43
RNF4-217ENST00000511892 NAT16Q8N8M0 369 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 IL17RCQ8NAC3 791 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 KCNV2Q8TDN2 545 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 NDRG1Q92597 394 aaKnown RBP6.12□□□□□ -1.43
RNF4-217ENST00000511892 KAT5Q92993 513 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 SECISBP2LQ93073 1101 aaKnown RBP6.12□□□□□ -1.43
RNF4-217ENST00000511892 EXOC4Q96A65 974 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 ACDQ96AP0 544 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 OTUB2Q96DC9 234 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 MED15Q96RN5 788 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 PNKPQ96T60 521 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 ZSWIM1Q9BR11 485 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 NACA2Q9H009 215 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 METTL14Q9HCE5 456 aaKnown RBP6.12□□□□□ -1.43
RNF4-217ENST00000511892 ZDHHC4Q9NPG8 344 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 ARHGEF4Q9NR80 690 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 SPHK2Q9NRA0 654 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 CLIC5Q9NZA1 410 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 EBF1Q9UH73 591 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 DNMT3LQ9UJW3 386 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 NAGPAQ9UK23 515 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 GMEB2Q9UKD1 530 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 TSPAN16Q9UKR8 245 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 RAB23Q9ULC3 237 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 MMP17Q9ULZ9 603 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 CTNND2Q9UQB3 1225 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.12□□□□□ -1.43
RNF4-217ENST00000511892 CEP295Q9C0D2 2601 aa6.12□□□□□ -1.43
RNF4-217ENST00000511892 PCNX2A6NKB5 2137 aa6.11□□□□□ -1.43
RNF4-217ENST00000511892 MUC22E2RYF6 1773 aaPredicted RBP6.11□□□□□ -1.43
RNF4-217ENST00000511892 FRYQ5TBA9 3013 aa6.11□□□□□ -1.43
RNF4-217ENST00000511892 ESPNB1AK53 854 aa6.11□□□□□ -1.43
RNF4-217ENST00000511892 SGK1O00141 431 aa6.11□□□□□ -1.43
RNF4-217ENST00000511892 XPO1O14980 1071 aaKnown RBP6.11□□□□□ -1.43
RNF4-217ENST00000511892 LRP3O75074 770 aa6.11□□□□□ -1.43
RNF4-217ENST00000511892 TULP3O75386 442 aa6.11□□□□□ -1.43
RNF4-217ENST00000511892 STC2O76061 302 aa6.11□□□□□ -1.43
RNF4-217ENST00000511892 KLF8O95600 359 aaPredicted RBP6.11□□□□□ -1.43
RNF4-217ENST00000511892 ADCY5O95622 1261 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms