RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 ZC3H12BQ5HYM0 836 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 ANKRD40Q6AI12 368 aa11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 SPATC1Q76KD6 591 aa11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 DPH6Q7L8W6 267 aa11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 LAPTM4BQ86VI4 370 aa11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 MB21D1Q8N884 522 aa11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 PSD4Q8NDX1 1056 aa11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 LPGAT1Q92604 370 aa11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 DACT3Q96B18 629 aaPredicted RBP11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 MCMBPQ9BTE3 642 aa11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 C1orf21Q9H246 121 aa11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 ERVMER34-1Q9H9K5 563 aa11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 PCOLCE2Q9UKZ9 415 aa11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 ANGEL1Q9UNK9 670 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 PPLO60437 1756 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 DDX60Q8IY21 1712 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 CACNA1FO60840 1977 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 MN1Q10571 1320 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 A6NL46 340 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 BTNL10A8MVZ5 291 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 ERVH48-1M5A8F1 160 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 ZNF263O14978 683 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 ASNA1O43681 348 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 MOCS3O95396 460 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 SLC2A3P11169 496 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 KRT10P13645 584 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 NPR3P17342 541 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 AMPD1P23109 780 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 EEF1GP26641 437 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 DCKP27707 260 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 PPP1R2P41236 205 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 ABCG1P45844 678 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 CABP4P57796 275 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 ZNF846Q147U1 533 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 TAF5Q15542 800 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 TAF1CQ15572 869 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 RBM20Q5T481 1227 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 PPP1R2P3Q6NXS1 205 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 FAM180BQ6P0A1 224 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 TTC27Q6P3X3 843 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 RNF19BQ6ZMZ0 732 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 RIPOR1Q6ZS17 1223 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 GPR142Q7Z601 462 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 RALYLQ86SE5 291 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 ADCK1Q86TW2 530 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 ZNF589Q86UQ0 364 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 IGFN1Q86VF2 1251 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 STX12Q86Y82 276 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 LACC1Q8IV20 430 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 SYTL1Q8IYJ3 562 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 LRRC71Q8N4P6 559 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 GANCQ8TET4 914 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 WASF1Q92558 559 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 KRT35Q92764 455 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 NKD2Q969F2 451 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 AHCYL2Q96HN2 611 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 WDR12Q9GZL7 423 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 WNT8AQ9H1J5 351 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 KCTD10Q9H3F6 313 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 GOLPH3Q9H4A6 298 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 MAGEE1Q9HCI5 957 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 PCDH12Q9NPG4 1184 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 KCNQ5Q9NR82 932 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 GIMAP4Q9NUV9 329 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 CEP72Q9P209 647 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 DNMT3BQ9UBC3 853 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 RWDD2AQ9UIY3 292 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 CNOT11Q9UKZ1 510 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 PPM1HQ9ULR3 514 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 DUSP10Q9Y6W6 482 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 NEXMIFQ5QGS0 1516 aa11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 XRN1Q8IZH2 1706 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 ZNFX1Q9P2E3 1918 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-210ENST00000508216 FAM187AA6NFU0 413 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 TSPY2A6NKD2 308 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 DYNC1LI2O43237 492 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 COBLO75128 1261 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 BAG2O95816 211 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 NPPAP01160 153 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 ATP5BP06576 529 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 TSPY3P0CV98 308 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 TSPY8P0CW00 308 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 SELLP14151 372 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 CDH5P33151 784 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 PGM1P36871 562 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 CASP2P42575 452 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 DNM2P50570 870 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 TSPY1Q01534 308 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 IKZF1Q13422 519 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 RFTN1Q14699 578 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 ABCB5Q2M3G0 1257 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 ZNF568Q3ZCX4 644 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 HSP90AA4PQ58FG1 418 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 SNAP47Q5SQN1 464 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 ITPRIPL1Q6GPH6 555 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 PLEKHA7Q6IQ23 1121 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 TTI2Q6NXR4 508 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 MFSD6Q6ZSS7 791 aa11.13□□□□□ -0.63
PDLIM5-210ENST00000508216 GALNT4Q8N4A0 578 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms