RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 ATP2A3Q93084 1043 aa4.13□□□□□ -1.75
CLOCK-207ENST00000508049 TRIM43Q96BQ3 446 aaPredicted RBP4.13□□□□□ -1.75
CLOCK-207ENST00000508049 ZNF668Q96K58 619 aaPredicted RBP4.13□□□□□ -1.75
CLOCK-207ENST00000508049 LRGUKQ96M69 825 aa4.13□□□□□ -1.75
CLOCK-207ENST00000508049 DHX36Q9H2U1 1008 aaKnown RBP4.13□□□□□ -1.75
CLOCK-207ENST00000508049 NMRK2Q9NPI5 230 aa4.13□□□□□ -1.75
CLOCK-207ENST00000508049 PAPOLBQ9NRJ5 636 aaKnown RBP4.13□□□□□ -1.75
CLOCK-207ENST00000508049 VPS45Q9NRW7 570 aa4.13□□□□□ -1.75
CLOCK-207ENST00000508049 SEMA5BQ9P283 1151 aa4.13□□□□□ -1.75
CLOCK-207ENST00000508049 CPNE7Q9UBL6 633 aa4.13□□□□□ -1.75
CLOCK-207ENST00000508049 SLC27A6Q9Y2P4 619 aa4.13□□□□□ -1.75
CLOCK-207ENST00000508049 USP19O94966 1318 aa4.13□□□□□ -1.75
CLOCK-207ENST00000508049 TRBV5-3A0A0A0MS03 114 aa4.12□□□□□ -1.75
CLOCK-207ENST00000508049 ACOT8O14734 319 aa4.12□□□□□ -1.75
CLOCK-207ENST00000508049 TMIGD3P0DMS9 266 aaPredicted RBP4.12□□□□□ -1.75
CLOCK-207ENST00000508049 TPH1P17752 444 aa4.12□□□□□ -1.75
CLOCK-207ENST00000508049 CPT1AP50416 773 aa4.12□□□□□ -1.75
CLOCK-207ENST00000508049 NFATC4Q14934 902 aa4.12□□□□□ -1.75
CLOCK-207ENST00000508049 DGKKQ5KSL6 1271 aa4.12□□□□□ -1.75
CLOCK-207ENST00000508049 NUGGCQ68CJ6 796 aa4.12□□□□□ -1.75
CLOCK-207ENST00000508049 NPNTQ6UXI9 565 aa4.12□□□□□ -1.75
CLOCK-207ENST00000508049 IQCF1Q8N6M8 205 aa4.12□□□□□ -1.75
CLOCK-207ENST00000508049 DNASE2BQ8WZ79 361 aa4.12□□□□□ -1.75
CLOCK-207ENST00000508049 MIB2Q96AX9 1013 aa4.12□□□□□ -1.75
CLOCK-207ENST00000508049 MSI2Q96DH6 328 aaKnown RBP4.12□□□□□ -1.75
CLOCK-207ENST00000508049 PRR11Q96HE9 360 aaPredicted RBP4.12□□□□□ -1.75
CLOCK-207ENST00000508049 MED30Q96HR3 178 aa4.12□□□□□ -1.75
CLOCK-207ENST00000508049 RBM38Q9H0Z9 239 aaKnown RBP4.12□□□□□ -1.75
CLOCK-207ENST00000508049 PCDH12Q9NPG4 1184 aa4.12□□□□□ -1.75
CLOCK-207ENST00000508049 STK32BQ9NY57 414 aa4.12□□□□□ -1.75
CLOCK-207ENST00000508049 PCDHA7Q9UN72 937 aa4.12□□□□□ -1.75
CLOCK-207ENST00000508049 COL4A3BPQ9Y5P4 624 aa4.12□□□□□ -1.75
CLOCK-207ENST00000508049 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.11□□□□□ -1.75
CLOCK-207ENST00000508049 AQP7P3A6NL99 342 aa4.11□□□□□ -1.75
CLOCK-207ENST00000508049 PRPF4O43172 522 aaKnown RBP eCLIP4.11□□□□□ -1.75
CLOCK-207ENST00000508049 GAS8-AS1O95177 125 aa4.11□□□□□ -1.75
CLOCK-207ENST00000508049 MBPP02686 304 aaPredicted RBP4.11□□□□□ -1.75
CLOCK-207ENST00000508049 TMEM225BP0DP42 221 aa4.11□□□□□ -1.75
CLOCK-207ENST00000508049 MYBP10242 640 aa4.11□□□□□ -1.75
CLOCK-207ENST00000508049 FGF3P11487 239 aaPredicted RBP4.11□□□□□ -1.75
CLOCK-207ENST00000508049 ZKSCAN1P17029 563 aaPredicted RBP4.11□□□□□ -1.75
CLOCK-207ENST00000508049 TFEBP19484 476 aa4.11□□□□□ -1.75
CLOCK-207ENST00000508049 YY1P25490 414 aa4.11□□□□□ -1.75
CLOCK-207ENST00000508049 ACVR2AP27037 513 aa4.11□□□□□ -1.75
CLOCK-207ENST00000508049 ODF3L2Q3SX64 289 aa4.11□□□□□ -1.75
CLOCK-207ENST00000508049 GRHL2Q6ISB3 625 aa4.11□□□□□ -1.75
CLOCK-207ENST00000508049 MAEAQ7L5Y9 396 aa4.11□□□□□ -1.75
CLOCK-207ENST00000508049 TRAPPC11Q7Z392 1133 aa4.11□□□□□ -1.75
CLOCK-207ENST00000508049 NR2C2APQ86WQ0 139 aa4.11□□□□□ -1.75
CLOCK-207ENST00000508049 SPATA2LQ8IUW3 424 aaPredicted RBP4.11□□□□□ -1.75
CLOCK-207ENST00000508049 UEVLDQ8IX04 471 aa4.11□□□□□ -1.75
CLOCK-207ENST00000508049 ZBTB34Q8NCN2 500 aa4.11□□□□□ -1.75
CLOCK-207ENST00000508049 SLC35G2Q8TBE7 412 aa4.11□□□□□ -1.75
CLOCK-207ENST00000508049 OIT3Q8WWZ8 545 aa4.11□□□□□ -1.75
CLOCK-207ENST00000508049 P2RY11Q96G91 374 aa4.11□□□□□ -1.75
CLOCK-207ENST00000508049 FAM83DQ9H4H8 585 aa4.11□□□□□ -1.75
CLOCK-207ENST00000508049 SAP30LQ9HAJ7 183 aa4.11□□□□□ -1.75
CLOCK-207ENST00000508049 MOV10Q9HCE1 1003 aaKnown RBP4.11□□□□□ -1.75
CLOCK-207ENST00000508049 FZD3Q9NPG1 666 aa4.11□□□□□ -1.75
CLOCK-207ENST00000508049 DNAJB11Q9UBS4 358 aa4.11□□□□□ -1.75
CLOCK-207ENST00000508049 AGO2Q9UKV8 859 aaKnown RBP4.11□□□□□ -1.75
CLOCK-207ENST00000508049 PNMA8BQ9ULN7 279 aaPredicted RBP4.11□□□□□ -1.75
CLOCK-207ENST00000508049 FAM227AF5H4B4 570 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 SPTLC2O15270 562 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 ATG13O75143 517 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 BRAFP15056 766 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 HOXA11P31270 313 aaPredicted RBP4.1□□□□□ -1.75
CLOCK-207ENST00000508049 IDUAP35475 653 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 MLH1P40692 756 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 VPS41P49754 854 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 RAE1P78406 368 aaKnown RBP4.1□□□□□ -1.75
CLOCK-207ENST00000508049 LTBQ06643 244 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 DNASE1L3Q13609 305 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 KCNAB1Q14722 419 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 CLCA4Q14CN2 919 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 CNGA3Q16281 694 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 C3orf38Q5JPI3 329 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 C9orf50Q5SZB4 431 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 FSTL5Q8N475 847 aaPredicted RBP4.1□□□□□ -1.75
CLOCK-207ENST00000508049 NR4A3Q92570 626 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 NMD3Q96D46 503 aaKnown RBP4.1□□□□□ -1.75
CLOCK-207ENST00000508049 AIFM3Q96NN9 605 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 TAAR9Q96RI9 348 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 SF3B5Q9BWJ5 86 aaKnown RBP4.1□□□□□ -1.75
CLOCK-207ENST00000508049 B3GNT5Q9BYG0 378 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 ZCWPW1Q9H0M4 648 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 THSD1Q9NS62 852 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 DKK4Q9UBT3 224 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 MID2Q9UJV3 735 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 VPS4AQ9UN37 437 aa4.1□□□□□ -1.75
CLOCK-207ENST00000508049 A0A0G2JK05 382 aa4.09□□□□□ -1.75
CLOCK-207ENST00000508049 TNFRSF13BO14836 293 aaPredicted RBP4.09□□□□□ -1.75
CLOCK-207ENST00000508049 TUSC2O75896 110 aa4.09□□□□□ -1.75
CLOCK-207ENST00000508049 IGKV3-20P01619 116 aa4.09□□□□□ -1.75
CLOCK-207ENST00000508049 KRT10P13645 584 aa4.09□□□□□ -1.75
CLOCK-207ENST00000508049 RBL1P28749 1068 aa4.09□□□□□ -1.75
CLOCK-207ENST00000508049 KCNJ4P48050 445 aa4.09□□□□□ -1.75
CLOCK-207ENST00000508049 COPAP53621 1224 aa4.09□□□□□ -1.75
CLOCK-207ENST00000508049 GFI1BQ5VTD9 330 aa4.09□□□□□ -1.75
CLOCK-207ENST00000508049 YAF2Q8IY57 180 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms