RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 DOLKQ9UPQ8 538 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 STARD13Q9Y3M8 1113 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 RBM19Q9Y4C8 960 aaKnown RBP7.48□□□□□ -1.21
VCAN-206ENST00000505615 RAD54BQ9Y620 910 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 UTP20O75691 2785 aaKnown RBP7.48□□□□□ -1.21
VCAN-206ENST00000505615 TBC1D3BA6NDS4 549 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 KCNJ18B7U540 433 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 CLDN3O15551 220 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 HOXC11O43248 304 aaPredicted RBP7.47□□□□□ -1.21
VCAN-206ENST00000505615 PAPSS1O43252 624 aaPredicted RBP7.47□□□□□ -1.21
VCAN-206ENST00000505615 PCDHGA12O60330 932 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 BRINP1O60477 761 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 NCAM1P13591 858 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 PFKLP17858 780 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 CD6P30203 668 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 KRT2P35908 639 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 GRK6P43250 576 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 RPL10AP62906 217 aaKnown RBP7.47□□□□□ -1.21
VCAN-206ENST00000505615 TARDBPQ13148 414 aaKnown RBP eCLIP7.47□□□□□ -1.21
VCAN-206ENST00000505615 STK3Q13188 491 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 PDIA5Q14554 519 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 NFE2Q16621 373 aaPredicted RBP7.47□□□□□ -1.21
VCAN-206ENST00000505615 KIF19Q2TAC6 998 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 PREPLQ4J6C6 727 aaPredicted RBP7.47□□□□□ -1.21
VCAN-206ENST00000505615 LY6G5CQ5SRR4 150 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 C10orf76Q5T2E6 689 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 ZNF468Q5VIY5 522 aaPredicted RBP7.47□□□□□ -1.21
VCAN-206ENST00000505615 DCAF12L1Q5VU92 463 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 KIAA1324Q6UXG2 1013 aaKnown RBP7.47□□□□□ -1.21
VCAN-206ENST00000505615 METTL23Q86XA0 190 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 THEM5Q8N1Q8 247 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 FGF11Q92914 225 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 ZNF274Q96GC6 653 aaPredicted RBP7.47□□□□□ -1.21
VCAN-206ENST00000505615 TOE1Q96GM8 510 aaKnown RBP7.47□□□□□ -1.21
VCAN-206ENST00000505615 TMEM176AQ96HP8 235 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 TSPAN18Q96SJ8 248 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 GABRG3Q99928 467 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 RNF38Q9H0F5 515 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 MIR1-1HGQ9H1L0 117 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 PCDHGA1Q9Y5H4 931 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 SNX11Q9Y5W9 270 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 CPQQ9Y646 472 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 AK5Q9Y6K8 562 aa7.47□□□□□ -1.21
VCAN-206ENST00000505615 CBX4O00257 560 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 SLC9A3R1O14745 358 aaPredicted RBP7.46□□□□□ -1.22
VCAN-206ENST00000505615 OGTO15294 1046 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 OAS1P00973 400 aaKnown RBP7.46□□□□□ -1.22
VCAN-206ENST00000505615 FAM157BP0CG42 384 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 JUPP14923 745 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 CD33P20138 364 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 CSNK1EP49674 416 aaKnown RBP7.46□□□□□ -1.22
VCAN-206ENST00000505615 TAF6P49848 677 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 PDE6CP51160 858 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 TSPY1Q01534 308 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 TMEM132DQ14C87 1099 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 TBC1D25Q3MII6 688 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 FOXD4L6Q3SYB3 417 aaPredicted RBP7.46□□□□□ -1.22
VCAN-206ENST00000505615 CFAP221Q4G0U5 840 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 ARHGAP40Q5TG30 622 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 HES3Q5TGS1 186 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 DIEXFQ68CQ4 756 aaKnown RBP7.46□□□□□ -1.22
VCAN-206ENST00000505615 FBXL19Q6PCT2 694 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 FOXD4L3Q6VB84 417 aaPredicted RBP7.46□□□□□ -1.22
VCAN-206ENST00000505615 C1orf186Q6ZWK4 172 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 PDCL2Q8N4E4 241 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 NAT16Q8N8M0 369 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 FSIP1Q8NA03 581 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 CADM4Q8NFZ8 388 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 SNRNP27Q8WVK2 155 aaKnown RBP7.46□□□□□ -1.22
VCAN-206ENST00000505615 NTPCRQ9BSD7 190 aaKnown RBP7.46□□□□□ -1.22
VCAN-206ENST00000505615 GPR174Q9BXC1 333 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 TRIM4Q9C037 500 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 RPF1Q9H9Y2 349 aaKnown RBP7.46□□□□□ -1.22
VCAN-206ENST00000505615 CPNE5Q9HCH3 593 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 SMPD4Q9NXE4 827 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 CFAP97Q9P2B7 532 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 FTSJ1Q9UET6 329 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 IL17BQ9UHF5 180 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 EIF2B4Q9UI10 523 aaKnown RBP7.46□□□□□ -1.22
VCAN-206ENST00000505615 L1RE1Q9UN81 338 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 CENPEQ02224 2701 aa7.46□□□□□ -1.22
VCAN-206ENST00000505615 RP1L1Q8IWN7 2480 aaPredicted RBP7.45□□□□□ -1.22
VCAN-206ENST00000505615 DOCK9Q9BZ29 2069 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 A0A1W2PNR3 127 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 E2F8A0AVK6 867 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 ZNF840PA6NDX5 716 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 SFI1A8K8P3 1242 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 METTL12A8MUP2 240 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 PRRT4C9JH25 899 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 H0Y8X5 98 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 HCRTO43612 131 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 RFPL3O75679 317 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 CTDNEP1O95476 244 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 IGLV3-19P01714 112 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 XBP1P17861 261 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 ACAT1P24752 427 aaKnown RBP7.45□□□□□ -1.22
VCAN-206ENST00000505615 CDC25AP30304 524 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 HNF1BP35680 557 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 CCT6AP40227 531 aaKnown RBP7.45□□□□□ -1.22
VCAN-206ENST00000505615 MAGEA11P43364 429 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms