RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 GOLGA6L6A8MZA4 724 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 TCP11X1B4DZS4 312 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 PRRT4C9JH25 899 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 ACKR2O00590 384 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 TRIM24O15164 1050 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 CNTN5O94779 1100 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 IGHV4-34P06331 123 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 ALPPL2P10696 532 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 CAPN3P20807 821 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 ITGA3P26006 1051 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 CD82P27701 267 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 UGT1A5P35504 534 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 GRM5P41594 1212 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 COPAP53621 1224 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 NMIQ13287 307 aaPredicted RBP4.51□□□□□ -1.69
CPNE4-204ENST00000505331 MRPL49Q13405 166 aaKnown RBP4.51□□□□□ -1.69
CPNE4-204ENST00000505331 ENPP2Q13822 863 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 E2F5Q15329 346 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 SYCP1Q15431 976 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 ANO4Q32M45 955 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 XKR9Q5GH70 373 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 ANKRD45Q5TZF3 282 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 EEF1DP3Q658K8 133 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 KIAA0895LQ68EN5 471 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 CDCA2Q69YH5 1023 aaPredicted RBP4.51□□□□□ -1.69
CPNE4-204ENST00000505331 PPP4R3AQ6IN85 833 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 TCTN3Q6NUS6 607 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 DSTYKQ6XUX3 929 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 TMC6Q7Z403 805 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 DSG4Q86SJ6 1040 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 DDX42Q86XP3 938 aaKnown RBP eCLIP4.51□□□□□ -1.69
CPNE4-204ENST00000505331 DTX1Q86Y01 620 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 C4orf19Q8IY42 314 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 ZNF654Q8IZM8 581 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 SLC25A45Q8N413 288 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 FBXO39Q8N4B4 442 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 PDCL2Q8N4E4 241 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 OR10T2Q8NGX3 314 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 WDR48Q8TAF3 677 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 IFI44Q8TCB0 444 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 OTUD7AQ8TE49 926 aaPredicted RBP4.51□□□□□ -1.69
CPNE4-204ENST00000505331 APOBEC4Q8WW27 367 aaKnown RBP4.51□□□□□ -1.69
CPNE4-204ENST00000505331 ZNF516Q92618 1163 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 C18orf25Q96B23 403 aaPredicted RBP4.51□□□□□ -1.69
CPNE4-204ENST00000505331 ARRDC3Q96B67 414 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 NACC1Q96RE7 527 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 SLC29A3Q9BZD2 475 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 LNPKQ9C0E8 428 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 C2orf40Q9H1Z8 148 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 LHX5Q9H2C1 402 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 DCTPP1Q9H773 170 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 C6orf50Q9HD87 102 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 SPHK2Q9NRA0 654 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 DNAJC17Q9NVM6 304 aaKnown RBP4.51□□□□□ -1.69
CPNE4-204ENST00000505331 ABI2Q9NYB9 513 aaPredicted RBP4.51□□□□□ -1.69
CPNE4-204ENST00000505331 CNTN3Q9P232 1028 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 SEL1LQ9UBV2 794 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 USP25Q9UHP3 1055 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 TP53TG5Q9Y2B4 290 aa4.51□□□□□ -1.69
CPNE4-204ENST00000505331 R3HCC1Q9Y3T6 440 aaKnown RBP4.51□□□□□ -1.69
CPNE4-204ENST00000505331 ANKHD1Q8IWZ3 2542 aaKnown RBP4.5□□□□□ -1.69
CPNE4-204ENST00000505331 KIAA1324LA8MWY0 1029 aaPredicted RBP4.5□□□□□ -1.69
CPNE4-204ENST00000505331 TMX2-CTNND1H3BSU7 103 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 SCAMP3O14828 347 aaKnown RBP4.5□□□□□ -1.69
CPNE4-204ENST00000505331 PRPF3O43395 683 aaKnown RBP4.5□□□□□ -1.69
CPNE4-204ENST00000505331 MAGEC1O60732 1142 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 SDC3O75056 442 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 DGAT1O75907 488 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 ODC1P11926 461 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 PAX3P23760 479 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 VARSP26640 1264 aaKnown RBP4.5□□□□□ -1.69
CPNE4-204ENST00000505331 ZBTB16Q05516 673 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 DMTNQ08495 405 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 CUL4AQ13619 759 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 BMT2Q1RMZ1 405 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 TTC22Q5TAA0 569 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 ATF7IP2Q5U623 682 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 MCTP1Q6DN14 999 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 CAVIN1Q6NZI2 390 aaKnown RBP4.5□□□□□ -1.69
CPNE4-204ENST00000505331 ASB18Q6ZVZ8 466 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 RAB11FIP2Q7L804 512 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 CDH24Q86UP0 819 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 CACUL1Q86Y37 369 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 DCP1BQ8IZD4 617 aaKnown RBP4.5□□□□□ -1.69
CPNE4-204ENST00000505331 GLIS1Q8NBF1 620 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 OR2T3Q8NH03 318 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 TATDN2Q93075 761 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 GJA10Q969M2 543 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 APOLD1Q96LR9 279 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 XPO6Q96QU8 1125 aaKnown RBP4.5□□□□□ -1.69
CPNE4-204ENST00000505331 DUSP9Q99956 384 aaKnown RBP4.5□□□□□ -1.69
CPNE4-204ENST00000505331 DSCC1Q9BVC3 393 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 TRIM9Q9C026 710 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 SEMA6CQ9H3T2 930 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 TSPY26PQ9H489 355 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 CYLDQ9NQC7 956 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.5□□□□□ -1.69
CPNE4-204ENST00000505331 SPTLC3Q9NUV7 552 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 SMPD4Q9NXE4 827 aa4.5□□□□□ -1.69
CPNE4-204ENST00000505331 BARHL2Q9NY43 387 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms