RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 PLS3P13797 630 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 ZNF12P17014 697 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 CDH3P22223 829 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 ALAS2P22557 587 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 CASP1P29466 404 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 KRT6CP48668 564 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 POLR2GP62487 172 aaKnown RBP eCLIP9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 CACNB1Q02641 598 aaPredicted RBP9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 LAMTOR4Q0VGL1 99 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 SMARCB1Q12824 385 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 CAPSQ13938 189 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 NFE2L1Q14494 772 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 C6orf132Q5T0Z8 1188 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 NT5DC1Q5TFE4 455 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 METTL11BQ5VVY1 283 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 ZNF449Q6P9G9 518 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 DHRS4L2Q6PKH6 230 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 DYMQ7RTS9 669 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 PEX26Q7Z412 305 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 NT5DC4Q86YG4 428 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 LRRC34Q8IZ02 419 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 ATP6V0D2Q8N8Y2 350 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 C12orf50Q8NA57 414 aaPredicted RBP9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 HELQQ8TDG4 1101 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 TMEM237Q96Q45 408 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 ZNF184Q99676 751 aaPredicted RBP9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 FAM49AQ9H0Q0 323 aaPredicted RBP9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 BLZF1Q9H2G9 400 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 OLFML3Q9NRN5 406 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 SFMBT1Q9UHJ3 866 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 AKT3Q9Y243 479 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 GPSM3Q9Y4H4 160 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 TRPV2Q9Y5S1 764 aa9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-207ENST00000503974 TRAV6A0A075B6T7 132 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 IQANK1A0A1B0GTG1 560 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 A8MX80 341 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 H0YGN5 161 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 FOXN3O00409 490 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 ENC1O14682 589 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 KATNA1O75449 491 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 FAM13AO94988 1023 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 ARHGEF15O94989 841 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 AFPP02771 609 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 VTNP04004 478 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 KRT18P05783 430 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 FAM153BP0C7A2 387 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 MAPTP10636 758 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 GAP43P17677 238 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 PSMA3P25788 255 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 PPARGP37231 505 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 RGS19P49795 217 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 PLTPP55058 493 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 NCKAP1LP55160 1127 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 HSD17B7P56937 341 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 ASIC1P78348 528 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 BFSP2Q13515 415 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 FAM153CQ494X1 144 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 KLHDC10Q6PID8 442 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 LRRC74BQ6ZQY2 392 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 DCDC5Q6ZRR9 648 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 RHPN2Q8IUC4 686 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 FLCNQ8NFG4 579 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 TTC8Q8TAM2 541 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 RMDN1Q96DB5 314 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 ALPK1Q96QP1 1244 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 ST6GALNAC4Q9H4F1 302 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 GDF3Q9NR23 364 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 UVRAGQ9P2Y5 699 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 FAM153AQ9UHL3 310 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 NFS1Q9Y697 457 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 ADGRA3Q8IWK6 1321 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 XPOTO43592 962 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 SNX3O60493 162 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 OR5F1O95221 314 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 KRT6AP02538 564 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 CHRNA1P02708 482 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 KRT6BP04259 564 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 TFPTP0C1Z6 253 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 OCM2P0CE71 109 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 OCMP0CE72 109 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 SELPP16109 830 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 MAN1A1P33908 653 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 THPOP40225 353 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 NPTX2P47972 431 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 BLVRAP53004 296 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 CRYBB1P53674 252 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 CD83Q01151 205 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 RNASELQ05823 741 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 COASYQ13057 564 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 PNOCQ13519 176 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 TFDP1Q14186 410 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 GRM2Q14416 872 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 ZNF618Q5T7W0 954 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 FAM122CQ6P4D5 195 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 LRRC8DQ7L1W4 858 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 DTX3Q8N9I9 347 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 CFAP36Q96G28 342 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 SAMD11Q96NU1 681 aa9.94□□□□□ -0.82
PDLIM5-207ENST00000503974 MRPL1Q9BYD6 325 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms