RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 Q8TCH9 128 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 KCNG4Q8TDN1 519 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 OSBPL9Q96SU4 736 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 ADOQ96SZ5 270 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 NUDT22Q9BRQ3 303 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 PLEKHA5Q9HAU0 1116 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 FBXO28Q9NVF7 368 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 ORC3Q9UBD5 711 aaPredicted RBP4.11□□□□□ -1.75
CALD1-224ENST00000498254 NRBP1Q9UHY1 535 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 CCNL1Q9UK58 526 aaPredicted RBP4.11□□□□□ -1.75
CALD1-224ENST00000498254 BAG5Q9UL15 447 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 CNPY2Q9Y2B0 182 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 PCDHA10Q9Y5I2 948 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 ITIH6Q6UXX5 1313 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 COL15A1P39059 1388 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 A0A0G2JLL6 359 aaPredicted RBP4.1□□□□□ -1.75
CALD1-224ENST00000498254 M0QZQ0 153 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 PSMD9O00233 223 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 RNASET2O00584 256 aaKnown RBP4.1□□□□□ -1.75
CALD1-224ENST00000498254 CTIFO43310 598 aaKnown RBP4.1□□□□□ -1.75
CALD1-224ENST00000498254 ZNF623O75123 536 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 CDKL5O76039 1030 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 LARGE1O95461 756 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 TFRCP02786 760 aaKnown RBP4.1□□□□□ -1.75
CALD1-224ENST00000498254 HSP90AA1P07900 732 aaKnown RBP4.1□□□□□ -1.75
CALD1-224ENST00000498254 CSF1P09603 554 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 ABCD3P28288 659 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 CXCR5P32302 372 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 PGM1P36871 562 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 LIPAP38571 399 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 ATXN1P54253 815 aaKnown RBP4.1□□□□□ -1.75
CALD1-224ENST00000498254 VAMP2P63027 116 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 MTAPQ13126 283 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 SEMA3BQ13214 749 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 ICAM4Q14773 271 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 SF3B3Q15393 1217 aaKnown RBP4.1□□□□□ -1.75
CALD1-224ENST00000498254 TBCCQ15814 346 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 TREML2Q5T2D2 321 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 ZNF585AQ6P3V2 769 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.1□□□□□ -1.75
CALD1-224ENST00000498254 ANKRD44Q8N8A2 993 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 FSIP1Q8NA03 581 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 SSH3Q8TE77 659 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 KTI12Q96EK9 354 aaPredicted RBP4.1□□□□□ -1.75
CALD1-224ENST00000498254 RNF125Q96EQ8 232 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 PTCD3Q96EY7 689 aaKnown RBP4.1□□□□□ -1.75
CALD1-224ENST00000498254 WDYHV1Q96HA8 205 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 PRR11Q96HE9 360 aaPredicted RBP4.1□□□□□ -1.75
CALD1-224ENST00000498254 HERC2P3Q9BVR0 1158 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 ARHGAP39Q9C0H5 1083 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 CLPBQ9H078 707 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 GALNT9Q9HCQ5 603 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 KRT84Q9NSB2 600 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 TBC1D22BQ9NU19 505 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 PI4KBQ9UBF8 816 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 DKK3Q9UBP4 350 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 NKX1-2Q9UD57 310 aaPredicted RBP4.1□□□□□ -1.75
CALD1-224ENST00000498254 ASAP1Q9ULH1 1129 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 TBX20Q9UMR3 447 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 CAMK2AQ9UQM7 478 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 ZBTB1Q9Y2K1 713 aa4.1□□□□□ -1.75
CALD1-224ENST00000498254 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.1□□□□□ -1.75
CALD1-224ENST00000498254 TBC1D3DA0A087WVF3 549 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 TBC1D3IA0A087WXS9 549 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 TBC1D3EA0A087X179 549 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 TBC1D3KA0A087X1G2 549 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 CCDC196A0A1B0GTZ2 297 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 FSD2A1L4K1 749 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 TBC1D3BA6NDS4 549 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 TBC1D3FA6NER0 549 aaPredicted RBP4.09□□□□□ -1.75
CALD1-224ENST00000498254 PATE3B3GLJ2 98 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 TBC1D3LB9A6J9 549 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 OVOL3O00110 214 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 AP4M1O00189 453 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 FIBPO43427 364 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 CHRM2P08172 466 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 TBC1D3HP0C7X1 549 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 CD19P15391 556 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 DDX6P26196 483 aaKnown RBP eCLIP4.09□□□□□ -1.75
CALD1-224ENST00000498254 PDE1AP54750 535 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 DCAF7P61962 342 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 DEUP1Q05D60 604 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 CLCA4Q14CN2 919 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 GPR68Q15743 365 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 NFIL3Q16649 462 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 AAK1Q2M2I8 961 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 AASDHQ4L235 1098 aaPredicted RBP4.09□□□□□ -1.75
CALD1-224ENST00000498254 RABL3Q5HYI8 236 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 TBC1D3GQ6DHY5 549 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 TBC1D3CQ6IPX1 549 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 SLC22A25Q6T423 547 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 C16orf89Q6UX73 402 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 KIAA1324Q6UXG2 1013 aaKnown RBP4.09□□□□□ -1.75
CALD1-224ENST00000498254 TBC1D3Q8IZP1 549 aaPredicted RBP4.09□□□□□ -1.75
CALD1-224ENST00000498254 LRRC71Q8N4P6 559 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 TDRD7Q8NHU6 1098 aaKnown RBP4.09□□□□□ -1.75
CALD1-224ENST00000498254 CLEC4CQ8WTT0 213 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 TBC1D22AQ8WUA7 517 aa4.09□□□□□ -1.75
CALD1-224ENST00000498254 CENPIQ92674 756 aaPredicted RBP4.09□□□□□ -1.75
CALD1-224ENST00000498254 FKBP10Q96AY3 582 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms