RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, human

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-208	ENST00000495327	KCNJ18	B7U540	433 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	SART1	O43290	800 aa	Known RBP	13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	THAP12	O43422	761 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	HR	O43593	1189 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	LETM1	O95202	739 aa	Predicted RBP	13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	APBB3	O95704	486 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	LATS1	O95835	1130 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	PENK	P01210	267 aa	Predicted RBP	13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	LTF	P02788	710 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	HOXC13	P31276	330 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	ACADSB	P45954	432 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	SEC13	P55735	322 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	APBA1	Q02410	837 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	KCNJ12	Q14500	433 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	ARHGAP44	Q17R89	818 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	C2orf27A	Q580R0	203 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	TCP11X2	Q5H9J9	407 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	GRAMD4	Q6IC98	578 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	NUDT18	Q6ZVK8	323 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	FMNL3	Q8IVF7	1028 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	CPXM2	Q8N436	756 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	NAT16	Q8N8M0	369 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	GAB3	Q8WWW8	586 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	HINFP	Q9BQA5	517 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	SAMSN1	Q9NSI8	373 aa	Known RBP	13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	DNAJC17	Q9NVM6	304 aa	Known RBP	13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	EBF1	Q9UH73	591 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	AGO1	Q9UL18	857 aa	Known RBP	13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	STARD13	Q9Y3M8	1113 aa		13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	MUC22	E2RYF6	1773 aa	Predicted RBP	13.94	□□□□□ -0.18
RBM28-208	ENST00000495327	ANTXRL	A6NF34	631 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	HMBS	P08397	361 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	ZNF445	P59923	1031 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	SIM2	Q14190	667 aa	Predicted RBP	13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	HSP90AA4P	Q58FG1	418 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	CDKAL1	Q5VV42	579 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	FYB2	Q5VWT5	728 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	DPY19L2P1	Q6NXN4	242 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	DENND1B	Q6P3S1	775 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	TPGS1	Q6ZTW0	290 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	BEND5	Q7L4P6	421 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	TRMT11	Q7Z4G4	463 aa	Known RBP	13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	RASSF3	Q86WH2	238 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	DENND1C	Q8IV53	801 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	IL17RC	Q8NAC3	791 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	CLEC4C	Q8WTT0	213 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	EDEM1	Q92611	657 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	GOLGA1	Q92805	767 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	TRIM62	Q9BVG3	475 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	SLC4A5	Q9BY07	1137 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	ACP6	Q9NPH0	428 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	STOML2	Q9UJZ1	356 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	FBXO10	Q9UK96	956 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	GMEB2	Q9UKD1	530 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	PCDHGC3	Q9UN70	934 aa		13.93	□□□□□ -0.18
RBM28-208	ENST00000495327	TNRC6B	Q9UPQ9	1833 aa	Known RBP	13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	CKAP5	Q14008	2032 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	NUP205	Q92621	2012 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	TBC1D3B	A6NDS4	549 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	PIK3R2	O00459	728 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	AXIN1	O15169	862 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	LRP3	O75074	770 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	RPP40	O75818	363 aa	Known RBP	13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	IGLV3-27	P01718	113 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	TIE1	P35590	1138 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	PXN	P49023	591 aa	Predicted RBP	13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	HARS2	P49590	506 aa	Known RBP	13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	DGKG	P49619	791 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	DGKE	P52429	567 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	SRSF5	Q13243	272 aa	Known RBP	13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	PDCL	Q13371	301 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	NNT	Q13423	1086 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	CRY1	Q16526	586 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	STX1A	Q16623	288 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	EOGT	Q5NDL2	527 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	C10orf76	Q5T2E6	689 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	CCDC183	Q5T5S1	534 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	PRR23B	Q6ZRT6	265 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	TMEM110	Q86TL2	294 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	ALLC	Q8N6M5	410 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	GPR161	Q8N6U8	529 aa	Known RBP	13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	TXNDC5	Q8NBS9	432 aa	Known RBP	13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	TSTD1	Q8NFU3	115 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	P2RY11	Q96G91	374 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	ST7	Q9NRC1	585 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	ANO10	Q9NW15	660 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	SFMBT1	Q9UHJ3	866 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	CYTH4	Q9UIA0	394 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	DNAJC12	Q9UKB3	198 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327	SLC27A6	Q9Y2P4	619 aa		13.92	□□□□□ -0.18
RBM28-208	ENST00000495327		E5RJQ4	531 aa		13.91	□□□□□ -0.18
RBM28-208	ENST00000495327	SGK1	O00141	431 aa		13.91	□□□□□ -0.18
RBM28-208	ENST00000495327	GFRA2	O00451	464 aa		13.91	□□□□□ -0.18
RBM28-208	ENST00000495327	TRIM24	O15164	1050 aa		13.91	□□□□□ -0.18
RBM28-208	ENST00000495327	MSI1	O43347	362 aa	Known RBP	13.91	□□□□□ -0.18
RBM28-208	ENST00000495327	KLF8	O95600	359 aa	Predicted RBP	13.91	□□□□□ -0.18
RBM28-208	ENST00000495327	CYBB	P04839	570 aa		13.91	□□□□□ -0.18
RBM28-208	ENST00000495327	RET	P07949	1114 aa		13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms