RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 APPL2Q8NEU8 664 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 ZNF398Q8TD17 642 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 ADAMTS18Q8TE60 1221 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 NSUN6Q8TEA1 469 aaKnown RBP2.52□□□□□ -2.01
PTPN12-212ENST00000494248 AFAP1L1Q8TED9 768 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 POF1BQ8WVV4 589 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 CCT6BQ92526 530 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 ANP32BQ92688 251 aaKnown RBP2.52□□□□□ -2.01
PTPN12-212ENST00000494248 KAT5Q92993 513 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 TBC1D31Q96DN5 1066 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 ZBTB10Q96DT7 871 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 FYTTD1Q96QD9 318 aaKnown RBP2.52□□□□□ -2.01
PTPN12-212ENST00000494248 SNX18Q96RF0 628 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 IWS1Q96ST2 819 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 MYD88Q99836 296 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 XPO4Q9C0E2 1151 aaKnown RBP2.52□□□□□ -2.01
PTPN12-212ENST00000494248 WDCPQ9H6R7 721 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 SMYD2Q9NRG4 433 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 TBC1D22BQ9NU19 505 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 TRMT13Q9NUP7 481 aaKnown RBP2.52□□□□□ -2.01
PTPN12-212ENST00000494248 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.52□□□□□ -2.01
PTPN12-212ENST00000494248 SERTAD3Q9UJW9 196 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 GJD2Q9UKL4 321 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 MAFFQ9ULX9 164 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 GABRQQ9UN88 632 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 FAM50BQ9Y247 325 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 ANKRD6Q9Y2G4 727 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 PCDHGB3Q9Y5G1 929 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 PCDHA3Q9Y5H8 950 aa2.52□□□□□ -2.01
PTPN12-212ENST00000494248 LRRFIP2Q9Y608 721 aaKnown RBP2.52□□□□□ -2.01
PTPN12-212ENST00000494248 hCG_1642624A0A1W2PR95 340 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 SMTNL1A8MU46 457 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 H3BNX3 289 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 SLC16A6O15403 523 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 SNUPNO95149 360 aaKnown RBP2.51□□□□□ -2.01
PTPN12-212ENST00000494248 MBD4O95243 580 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 ATXN1LP0C7T5 689 aaKnown RBP2.51□□□□□ -2.01
PTPN12-212ENST00000494248 GLULP15104 373 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 ZKSCAN1P17029 563 aaPredicted RBP2.51□□□□□ -2.01
PTPN12-212ENST00000494248 CCND1P24385 295 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 PRDX5P30044 214 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 THBS4P35443 961 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 ADD2P35612 726 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 RAD52P43351 418 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 MAPK9P45984 424 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 STT3AP46977 705 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 ALDH5A1P51649 535 aaPredicted RBP2.51□□□□□ -2.01
PTPN12-212ENST00000494248 ZNF132P52740 706 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 TPTEP56180 551 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 SNX16P57768 344 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 BTKQ06187 659 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 GALEQ14376 348 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 ZNF268Q14587 947 aaPredicted RBP2.51□□□□□ -2.01
PTPN12-212ENST00000494248 PTPN21Q16825 1174 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 ARHGAP29Q52LW3 1261 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 TMEM240Q5SV17 173 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 TMEM63BQ5T3F8 832 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 FAAH2Q6GMR7 532 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 FAM180BQ6P0A1 224 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 ZNF549Q6P9A3 640 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 CPLX2Q6PUV4 134 aaKnown RBP2.51□□□□□ -2.01
PTPN12-212ENST00000494248 CCDC73Q6ZRK6 1079 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 Q6ZWC4 215 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 EPM2AIP1Q7L775 607 aaPredicted RBP2.51□□□□□ -2.01
PTPN12-212ENST00000494248 GALNT5Q7Z7M9 940 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 ZNF329Q86UD4 541 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 NBPF5PQ86XG9 351 aaPredicted RBP2.51□□□□□ -2.01
PTPN12-212ENST00000494248 FAM46DQ8NEK8 389 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 PARD3BQ8TEW8 1205 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 GLG1Q92896 1179 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 TRIM63Q969Q1 353 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 ATP6V1E2Q96A05 226 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 GCC1Q96CN9 775 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 AIFM3Q96NN9 605 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 SLC46A1Q96NT5 459 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 SPAG5Q96R06 1193 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 MMS19Q96T76 1030 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 MAP3K14Q99558 947 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 EIF2AK1Q9BQI3 630 aaKnown RBP2.51□□□□□ -2.01
PTPN12-212ENST00000494248 FAM167BQ9BTA0 163 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 SLC13A1Q9BZW2 595 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 ATP6V0A4Q9HBG4 840 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 HELLSQ9NRZ9 838 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.51□□□□□ -2.01
PTPN12-212ENST00000494248 BLOC1S4Q9NUP1 217 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 NKIRAS2Q9NYR9 191 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 PDP2Q9P2J9 529 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 EPS15L1Q9UBC2 864 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 SEL1LQ9UBV2 794 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 TPCN1Q9ULQ1 816 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 AGAP1Q9UPQ3 857 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 TMX2Q9Y320 296 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 SNX5Q9Y5X3 404 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 SQORQ9Y6N5 450 aa2.51□□□□□ -2.01
PTPN12-212ENST00000494248 ANKRD18BA2A2Z9 1011 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 C19orf81C9J6K1 198 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 TMEM232C9JQI7 657 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 M0QYG6 137 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 CPLX1O14810 134 aa2.5□□□□□ -2.01
PTPN12-212ENST00000494248 CNOT3O75175 753 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms